Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0847
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 29 4.4
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 29 4.4
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical pr... 29 4.4
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 29 4.4
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 29 4.4
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical
protein F47D12.5 protein.
Length = 633
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 289 SKDIVRECFPVEFTLIFAENNIKLMYKRDGLALTLRDDSNNDGRLAYGDGKDKTSPKVSW 468
+ ++RECFP +I + +Y ++G+ + DS DG L + K+S +
Sbjct: 543 ANSLIRECFPEISNVIKIPVSDSKIYVKNGILKKILKDSREDGSLLWALLVIKSSMEQDK 602
Query: 469 KFVPL 483
FV L
Sbjct: 603 SFVNL 607
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 68 VASLYANGTSVSDSKLEDDLYNSILVADYDNAVE---KSKQIYEDKKSEV 208
+ L N + + S E D Y ADYD +E + ++ Y DKKSE+
Sbjct: 250 IRQLETNKSEIVSSYHELDCYQETPEADYDTFIELVNQKRREYADKKSEM 299
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 84 PTEPQSPTPNSKTIFTTASSLPITT---MPLKKANRSTRTRRAKSSQMS*TNSYETTR 248
PT Q+ TP + TI TT +P TT PL+K N + A S M N T +
Sbjct: 94 PTSTQTTTPTTTTITTT--PVPTTTPYLSPLEKFNEAMNNDGAFKSLMDVINFNSTAK 149
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 81 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 245
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 81 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 245
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 81 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 245
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 81 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 245
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293
>U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical
protein F14D12.1a protein.
Length = 680
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 159 MPLKKANRSTRTRRAKSSQMS*TNSYETTR*THGVRLP 272
+P + + R+ ++ SS + NS +TTR T VRLP
Sbjct: 585 LPKQPSQRTLTLQQQSSSSIDSLNSTQTTRTTSSVRLP 622
>U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical
protein F14D12.1b protein.
Length = 713
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 159 MPLKKANRSTRTRRAKSSQMS*TNSYETTR*THGVRLP 272
+P + + R+ ++ SS + NS +TTR T VRLP
Sbjct: 585 LPKQPSQRTLTLQQQSSSSIDSLNSTQTTRTTSSVRLP 622
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 501 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVVAVIAQRQSKTV 373
+L++LP LP++ TR+ GK +V+A S T+
Sbjct: 781 ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTI 823
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 501 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVVAVIAQRQSKTV 373
+L++LP LP++ TR+ GK +V+A S T+
Sbjct: 781 ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTI 823
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 77 LYANGTSVSDSKLEDDLYNSILVADYDNAVEK--SKQIYE-DKKSEVITNVVNKLIRNNK 247
+YA S D LE DL+N + +Y++ + K +++++ KK E NV+N+ I
Sbjct: 318 MYAQSDSSLDHLLEWDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIHRRD 377
Query: 248 MN 253
++
Sbjct: 378 VS 379
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 84 PTEPQSPTPNSKTIFTTASSLPITTMPLKKAN 179
PT + TP+S + T SSLP T+ L N
Sbjct: 206 PTADNASTPSSSSSITATSSLPTTSSSLSVYN 237
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 93 PQSPTPNSKTIFTTAS-SLPITTMPLKKANRSTRTR 197
PQ P P +T T +LP TT+P+ N++ RT+
Sbjct: 762 PQVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRTK 797
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,361,205
Number of Sequences: 27780
Number of extensions: 270730
Number of successful extensions: 988
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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