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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0847
         (715 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 prot...    34   0.11 
At3g30550.1 68416.m03866 hypothetical protein includes At2g05890...    34   0.11 
At3g27720.1 68416.m03461 zinc finger protein-related contains Pf...    34   0.11 
At3g27710.1 68416.m03460 zinc finger protein-related contains si...    31   0.57 
At4g14900.1 68417.m02288 hydroxyproline-rich glycoprotein family...    29   3.1  
At3g18590.1 68416.m02363 plastocyanin-like domain-containing pro...    29   4.0  
At4g31110.1 68417.m04415 wall-associated kinase, putative simila...    28   5.3  
At4g31100.1 68417.m04414 wall-associated kinase, putative              28   5.3  
At4g13040.1 68417.m02035 AP2 domain-containing transcription fac...    28   5.3  
At5g04780.1 68418.m00494 SEC14 cytosolic factor-related contains...    28   7.1  
At1g19390.1 68414.m02412 wall-associated kinase, putative simila...    28   7.1  
At5g52950.1 68418.m06570 expressed protein ; expression supporte...    27   9.3  

>At3g44050.1 68416.m04718 kinesin motor protein-related KLP2
           protein, Xenopus laevis, PIR:T30335
          Length = 1229

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = +2

Query: 17  EPDAQKMKT-VQVILCLFVASLYANGTSVSDSKLEDDLYNSI--LVADYDNAVEKSKQIY 187
           + D  ++KT VQ I C+      A+ T++  SK  DDL   I  L+ D +  +E  +Q+ 
Sbjct: 709 DDDQMEVKTMVQAIACVSQREAEAHETAIKLSKENDDLRQKIKVLIEDNNKLIELYEQVA 768

Query: 188 EDKKSEVITNVVNKLIRNN 244
           E+  S     +      NN
Sbjct: 769 EENSSRAWGKIETDSSSNN 787


>At3g30550.1 68416.m03866 hypothetical protein includes At2g05890,
           At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
           At1g39430, At2g10460, At4g03640, At5g35250
          Length = 509

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +2

Query: 32  KMKTVQVILCLFVASLYANGTSVSDSKL-EDDLYNSILVADYDNAVEKSKQIYEDKKSEV 208
           K KT Q +LC+   +++    S + +++  D++ + I+  DYD  V+ S  I  ++ S +
Sbjct: 398 KGKTFQFLLCVQRENIFGGYDSFTVARVYTDNIADEIVQEDYDAYVDPSSLISIEQDSLM 457

Query: 209 ITNVVNKLIRNNKMNSWSTPTS 274
           +TN V+  + +  ++S  TP+S
Sbjct: 458 LTNGVD--LSDVDLSSTFTPSS 477


>At3g27720.1 68416.m03461 zinc finger protein-related contains
           Pfam:PF01485 IBR domain
          Length = 493

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 23/85 (27%), Positives = 42/85 (49%)
 Frame = +2

Query: 14  REPDAQKMKTVQVILCLFVASLYANGTSVSDSKLEDDLYNSILVADYDNAVEKSKQIYED 193
           +E   ++++  Q  L  +    Y     +   KLED L  SIL     N+  K ++++  
Sbjct: 291 KEEKVRQLERAQRDLDRYTHYHYRYKAHIDSLKLEDKLKKSILKKAVLNSETKDQKVF-- 348

Query: 194 KKSEVITNVVNKLIRNNKMNSWSTP 268
           K+   I + VN+L R+ ++ S+S P
Sbjct: 349 KEYSWIIDAVNRLFRSRRILSYSYP 373


>At3g27710.1 68416.m03460 zinc finger protein-related contains
           similarity to zinc finger proteins and Pfam domain,
           PF01485: IBR domain
          Length = 537

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +2

Query: 80  YANGTSVSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMNSW 259
           Y     +   KLED L  SIL     N+  K ++++  K+   +T+ VN+L  + ++ S 
Sbjct: 353 YRYKAHIDSLKLEDKLRKSILEKAVSNSETKDQKVF--KEYSWVTDAVNRLFISRRILSQ 410

Query: 260 STP 268
           S P
Sbjct: 411 SYP 413


>At4g14900.1 68417.m02288 hydroxyproline-rich glycoprotein family
           protein
          Length = 532

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +1

Query: 247 DELMEYAYQLWMQGSK-DIVRECFPVEFTLIFAENNIKLMYKRDGLALT--LRDDSNNDG 417
           D++ +   +L ++G + D V   F V    +F    +   Y RD    T  + DDSNN G
Sbjct: 299 DQMPDMIEELIIRGQQLDAVHFTFEVGLVHLFPPVPLLKAYLRDAKKATALITDDSNNSG 358

Query: 418 RLAY 429
           R A+
Sbjct: 359 RSAH 362


>At3g18590.1 68416.m02363 plastocyanin-like domain-containing
           protein
          Length = 188

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +3

Query: 96  QSPTPNSKTIFTTASSLPITTMPLKKAN 179
           +SP P+S +  +++SSLP +T   KK+N
Sbjct: 134 ESPPPSSSSSSSSSSSLPASTPKAKKSN 161


>At4g31110.1 68417.m04415 wall-associated kinase, putative similar
           to wall-associated kinase 1, Arabidopsis thaliana,
           gb:AJ009696
          Length = 756

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 125 LYNSILVADYDNAVEKSKQIYEDKKSEVITNVV 223
           +Y  +LV     AV+KSK I EDK  E I  VV
Sbjct: 430 VYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVV 462


>At4g31100.1 68417.m04414 wall-associated kinase, putative
          Length = 786

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 125 LYNSILVADYDNAVEKSKQIYEDKKSEVITNVV 223
           +Y  +LV     AV+KSK I EDK  E I  VV
Sbjct: 458 VYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVV 490


>At4g13040.1 68417.m02035 AP2 domain-containing transcription factor
           family protein contains Pfam profile PF00847: AP2 domain
          Length = 226

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +3

Query: 102 PTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSY 236
           P PN++  +    +  +TT+ ++K     R+RR +S  M   + Y
Sbjct: 36  PNPNARAAYNPGPAETVTTVIVEKKAIEERSRRTRSKHMHFRSDY 80


>At5g04780.1 68418.m00494 SEC14 cytosolic factor-related contains
           Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
           CRAL/TRIO, N-terminus; contains Pfam profile PF01535:
           PPR repeat (three copies)
          Length = 864

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = -2

Query: 573 GFGSGLF*LTTSNTDYAECSQSEVDLVVLPQRNELPADFWTRLVLAIA 430
           GFGS +F  +++   YA+C       ++  +  E   + W  ++   A
Sbjct: 285 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFA 332


>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
           to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
           Biol. 39 (6), 1189-1196 (1999))
          Length = 788

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 125 LYNSILVADYDNAVEKSKQIYEDKKSEVITNVV 223
           +Y  +LV     AV+KSK + EDK  E I  VV
Sbjct: 465 VYKGMLVDGRTVAVKKSKVVDEDKLEEFINEVV 497


>At5g52950.1 68418.m06570 expressed protein ; expression supported
           by MPSS
          Length = 945

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 83  ANGTSVSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMN--S 256
           +NG S+    L+   ++S L+  +DN V      +ED + +V  +   +  R N +N  S
Sbjct: 436 SNG-SLRTGILKPFTFSSALICVFDNGVSPQTVDHEDSRKKVSCSEYKRKPRKNSLNDIS 494

Query: 257 W 259
           W
Sbjct: 495 W 495


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,521,556
Number of Sequences: 28952
Number of extensions: 251362
Number of successful extensions: 922
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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