Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0844
         (658 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4C51 Cluster: PREDICTED: similar to monocarbox...    36   0.86 
UniRef50_Q9W509 Cluster: EG:103B4.3 protein; n=4; Diptera|Rep: E...    34   3.5  
UniRef50_Q16ZX4 Cluster: Monocarboxylate transporter; n=2; Endop...    33   6.0  
UniRef50_A0BPC8 Cluster: Chromosome undetermined scaffold_12, wh...    33   8.0  
UniRef50_A5UMP3 Cluster: Cobalamin biosynthesis protein D, CobD;...    33   8.0  

>UniRef50_UPI00015B4C51 Cluster: PREDICTED: similar to
           monocarboxylate transporter; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to monocarboxylate
           transporter - Nasonia vitripennis
          Length = 578

 Score = 35.9 bits (79), Expect = 0.86
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +2

Query: 587 GGWGXXVVFAXSWXTLVTDGVTYS 658
           GGWG  VVFA     ++TDGVTYS
Sbjct: 36  GGWGWVVVFASFMVHVITDGVTYS 59


>UniRef50_Q9W509 Cluster: EG:103B4.3 protein; n=4; Diptera|Rep:
           EG:103B4.3 protein - Drosophila melanogaster (Fruit fly)
          Length = 626

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 587 GGWGXXVVFAXSWXTLVTDGVTYS 658
           GGWG  VVF      +VTDG+TYS
Sbjct: 31  GGWGWVVVFGSFMIHIVTDGMTYS 54


>UniRef50_Q16ZX4 Cluster: Monocarboxylate transporter; n=2;
           Endopterygota|Rep: Monocarboxylate transporter - Aedes
           aegypti (Yellowfever mosquito)
          Length = 606

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 587 GGWGXXVVFAXSWXTLVTDGVTYS 658
           GGWG  VV A     +VTDG+TYS
Sbjct: 45  GGWGWMVVLASFSIHIVTDGITYS 68


>UniRef50_A0BPC8 Cluster: Chromosome undetermined scaffold_12, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_12,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 59

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +1

Query: 400 FEENKITKIITHLENRLYLIKNHYNCLRSVPKCL 501
           FE+NKITKI+   +++  L K++    RS+PKCL
Sbjct: 9   FEQNKITKILIS-KSKFTLEKDNNQIDRSIPKCL 41


>UniRef50_A5UMP3 Cluster: Cobalamin biosynthesis protein D, CobD;
           n=1; Methanobrevibacter smithii ATCC 35061|Rep:
           Cobalamin biosynthesis protein D, CobD -
           Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
           861)
          Length = 347

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = +2

Query: 119 YCVVPSKLKISARKGNVHGLLEAIFIRQRNDKPELALVIMVCDQRCRLLI---YFFLFTL 289
           Y  +P+K+      G++    + IFI+ +N    L L +  C     LLI   Y F F +
Sbjct: 44  YGELPTKIHPVVFIGSIISFFKNIFIKIKNRWSGLFLTLSTCIVSSVLLIILFYLFSFNI 103

Query: 290 PIFYVIYKALSRISASI 340
            IFY+++  +   + SI
Sbjct: 104 IIFYILFTLILSSTFSI 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,998,290
Number of Sequences: 1657284
Number of extensions: 9364862
Number of successful extensions: 24011
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23999
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)