Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0844
         (658 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010002-1|AAQ22471.1|  626|Drosophila melanogaster RE29708p pro...    34   0.20 
AL009193-1|CAA15693.1|  626|Drosophila melanogaster EG:103B4.3 p...    34   0.20 
AE014298-359|AAF45749.2|  626|Drosophila melanogaster CG3456-PA ...    34   0.20 
AE014296-3291|AAF49057.1|  352|Drosophila melanogaster CG6996-PA...    28   9.7  

>BT010002-1|AAQ22471.1|  626|Drosophila melanogaster RE29708p
           protein.
          Length = 626

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 587 GGWGXXVVFAXSWXTLVTDGVTYS 658
           GGWG  VVF      +VTDG+TYS
Sbjct: 31  GGWGWVVVFGSFMIHIVTDGMTYS 54


>AL009193-1|CAA15693.1|  626|Drosophila melanogaster EG:103B4.3
           protein.
          Length = 626

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 587 GGWGXXVVFAXSWXTLVTDGVTYS 658
           GGWG  VVF      +VTDG+TYS
Sbjct: 31  GGWGWVVVFGSFMIHIVTDGMTYS 54


>AE014298-359|AAF45749.2|  626|Drosophila melanogaster CG3456-PA
           protein.
          Length = 626

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 587 GGWGXXVVFAXSWXTLVTDGVTYS 658
           GGWG  VVF      +VTDG+TYS
Sbjct: 31  GGWGWVVVFGSFMIHIVTDGMTYS 54


>AE014296-3291|AAF49057.1|  352|Drosophila melanogaster CG6996-PA
           protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 115 NVLCRTVEIEDISKKGKCTRLTGSYLYPTK 204
           NV C  V + DISKKG C   TG ++   K
Sbjct: 183 NVECDFVPVPDISKKGVCPE-TGGFISDNK 211


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,762,935
Number of Sequences: 53049
Number of extensions: 427680
Number of successful extensions: 890
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)