Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0841
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   2.0  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.0  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.1  

>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 186 YNCMKFKWKRLIESIMYWNSSLG*SIVVLKWND 88
           + CMK KW  L  S+ + N      +   KW +
Sbjct: 153 FKCMKEKWIPLCNSVTFSNFGYKQCVENRKWQN 185


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 186 YNCMKFKWKRLIESIMYWNSSLG*SIVVLKWND 88
           + CMK KW  L  S+ + N      +   KW +
Sbjct: 386 FKCMKEKWIPLCNSVTFSNFGYKQCVENRKWQN 418


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 186 YNCMKFKWKRLIESIMYWNSSLG*SIVVLKWND 88
           + CMK KW  L  S+ + N      +   KW +
Sbjct: 386 FKCMKEKWIPLCNSVTFSNFGYKQCVENRKWQN 418


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 91  IPFQNYDTSPQGRIPVHDGL 150
           +P   Y  SP G IP H GL
Sbjct: 217 LPSDFYRFSPTGLIPPHPGL 236


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 91  IPFQNYDTSPQGRIPVHDGL 150
           +P   Y  SP G IP H GL
Sbjct: 109 LPSDFYRFSPTGLIPPHPGL 128


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 539 KSQKVHIADFGLTTTICSFSR 601
           +S    +  FGL T + SFSR
Sbjct: 420 RSYTYQVLPFGLKTAVGSFSR 440


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 539 KSQKVHIADFGLTTTICSFSRW 604
           K    H+ D+ LTT +   S W
Sbjct: 267 KDPNSHLYDYDLTTHVMLLSDW 288


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 539 KSQKVHIADFGLTTTICSFSRW 604
           K    H+ D+ LTT +   S W
Sbjct: 267 KDPNSHLYDYDLTTHVMLLSDW 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,221
Number of Sequences: 336
Number of extensions: 3762
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)