Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0841
(763 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0056 + 12451510-12451554,12453099-12453149,12453754-124538... 73 3e-13
07_03_1281 - 25439634-25439750,25439868-25440071,25440328-254404... 72 4e-13
07_01_0060 - 445619-445739,446026-446182,446274-446365,446516-44... 71 1e-12
10_07_0057 + 12460986-12461036,12461108-12461161,12461420-124614... 69 5e-12
09_04_0231 + 15875955-15876005,15876141-15876191,15877911-158779... 49 4e-06
03_01_0591 - 4366400-4366558,4366782-4366985,4367078-4367152,436... 43 2e-04
07_01_0901 + 7578143-7578327,7578430-7578455,7578576-7578606,757... 28 7.1
>10_07_0056 +
12451510-12451554,12453099-12453149,12453754-12453804,
12453879-12453944,12454011-12454072,12454459-12454537,
12454618-12454722,12454824-12454934,12455017-12455154,
12455298-12455399,12455400-12455474,12455574-12455694,
12455768-12455922,12456004-12456078,12456160-12456363,
12457105-12457221
Length = 518
Score = 72.9 bits (171), Expect = 3e-13
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2
Query: 5 PDEFYCLRLLEETGVCVIPGTGFGQLPGSFHFRTTILHPKDEFQYMMDSIRRFHLNFMQL 184
PD FY LRLLE TG+ V+PG+GFGQ+PG++H R TIL +++ ++ + FH FM
Sbjct: 456 PDAFYALRLLEATGIVVVPGSGFGQVPGTWHIRCTILPQEEKIPAIISRFKAFHEGFMAA 515
Query: 185 Y 187
Y
Sbjct: 516 Y 516
>07_03_1281 -
25439634-25439750,25439868-25440071,25440328-25440402,
25440477-25440631,25440704-25440824,25440946-25441020,
25441216-25441353,25441617-25441727,25441883-25441987,
25442061-25442139,25442488-25442549,25442634-25442699,
25442812-25442907,25443353-25443403,25443629-25443709
Length = 511
Score = 72.1 bits (169), Expect = 4e-13
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +2
Query: 5 PDEFYCLRLLEETGVCVIPGTGFGQLPGSFHFRTTILHPKDEFQYMMDSIRRFHLNFM 178
PD +Y RLLE TG+ V+PG+GFGQ+PG++HFR TIL +D+ ++ + FH FM
Sbjct: 449 PDAYYARRLLEATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIISKFKEFHEKFM 506
>07_01_0060 -
445619-445739,446026-446182,446274-446365,446516-446580,
447052-447117,447707-447838,448125-448298,449025-449183,
449297-449384,449492-449573,449757-449874,449959-450162
Length = 485
Score = 70.9 bits (166), Expect = 1e-12
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = +2
Query: 8 DEFYCLRLLEETGVCVIPGTGFGQLPGSFHFRTTILHPKDEFQYMMDSIRRFHLNFMQLY 187
D FYCL+LLE TG+ +PG+GFGQ G FH RTTIL +++ +M S ++F+ FM Y
Sbjct: 420 DVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMTSFKKFNDTFMDQY 479
>10_07_0057 +
12460986-12461036,12461108-12461161,12461420-12461482,
12461666-12461716,12461996-12462057,12462156-12462318,
12462829-12462939,12463029-12463166,12463248-12463322,
12463420-12463540,12464827-12464981,12465080-12465154,
12465270-12465473,12465670-12465786
Length = 479
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +2
Query: 5 PDEFYCLRLLEETGVCVIPGTGFGQLPGSFHFRTTILHPKDEFQYMMDSIRRFHLNFMQ 181
PD FY LRLLE TG+ V+PG+ FGQ+PG++HFR TIL +++ + ++ FH FM+
Sbjct: 417 PDVFYALRLLESTGIVVVPGSVFGQVPGTWHFRCTILPQEEKTRQIISRFNVFHEAFME 475
>09_04_0231 +
15875955-15876005,15876141-15876191,15877911-15877976,
15878073-15878134,15878639-15878717,15878839-15878943,
15879032-15879142,15879492-15879629,15879821-15879895,
15880011-15880131,15880196-15880350,15880605-15880679,
15881124-15881327,15881396-15881536
Length = 477
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Frame = +2
Query: 5 PDEFYCLRLLEETGVCVIPGTGF--------GQLPGSFHFRTTILHPKDEFQYMMDSIRR 160
PD FY RLL+ TG+ V+PG+GF ++ G+ H R TIL ++ M+ S++
Sbjct: 407 PDVFYAHRLLDATGIAVVPGSGFHPDLVSSCKKVSGTSHIRCTILPGEETITAMVPSLQA 466
Query: 161 FHLNFM 178
FH FM
Sbjct: 467 FHEAFM 472
>03_01_0591 -
4366400-4366558,4366782-4366985,4367078-4367152,
4367240-4367394,4367476-4367596,4367720-4367794,
4369435-4369572,4369655-4369765,4369844-4369948,
4370327-4370405,4370561-4370622,4370698-4370763,
4370840-4371024,4371095-4371173
Length = 537
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 5 PDEFYCLRLLEETGVCVIPGTGFGQL 82
PD FY LRLL+ TG+ V PG+GFGQ+
Sbjct: 461 PDVFYALRLLDTTGIVVTPGSGFGQI 486
>07_01_0901 +
7578143-7578327,7578430-7578455,7578576-7578606,
7578690-7578777,7578889-7579034,7579641-7579685,
7579776-7579879,7579976-7580112,7580553-7580654,
7581375-7581587
Length = 358
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = -3
Query: 125 PWGEVS*F*NGMILEAARIP------YPGSHTLQFPPTA 27
P S F G + +AAR P +PG H FPPTA
Sbjct: 320 PTAASSGFSTGTVADAARSPSSRPHPFPGHHQFYFPPTA 358
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,191,364
Number of Sequences: 37544
Number of extensions: 364035
Number of successful extensions: 815
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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