Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0840
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.22 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   4.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.2  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 88  KFLETLGSIATKAYDLRSLLFLR 20
           +FLE  G +A  A DLR  LF R
Sbjct: 379 RFLEPFGVMADPAVDLRDPLFFR 401


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 295 QAELGXSHVLRSAAGLTTKNISSFLSQRKXSQIGA 399
           QAE   S  +   A L T+N SS L     +  GA
Sbjct: 259 QAEFTLSGQVMKYAALATENFSSLLEPAVGTMTGA 293


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = +3

Query: 63  ILPKVSKNLRKWHPKLSSPPLFVML 137
           I+P++   +  W+P   + P+ V +
Sbjct: 521 IMPRIQAEVNIWNPLTDTIPIHVWI 545


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +3

Query: 69  PKVSKNLRKWHPKLSSP---PLFVMLRSGATP 155
           PKV++ +   HP+ + P     F +  +G TP
Sbjct: 173 PKVNETVAATHPRYADPDDCQYFYVCINGDTP 204


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 103 GCHFRKFLETLGSIATKAYDLR 38
           G H  +  E L +I   +YDLR
Sbjct: 196 GYHVPELCELLDAIHVMSYDLR 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,768
Number of Sequences: 336
Number of extensions: 1037
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)