Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0840
         (410 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J04973-1|AAA35710.1|  453|Homo sapiens protein ( Human cytochrom...    44   1e-04
BC003136-1|AAH03136.1|  453|Homo sapiens ubiquinol-cytochrome c ...    44   1e-04
BC000484-1|AAH00484.1|  453|Homo sapiens UQCRC2 protein protein.       44   1e-04
BC046117-1|AAH46117.1|  258|Homo sapiens DNALI1 protein protein.       31   1.5  
BC039074-1|AAH39074.1|  258|Homo sapiens DNALI1 protein protein.       31   1.5  
AL034379-10|CAI20553.1|  280|Homo sapiens dynein, axonemal, ligh...    31   1.5  

>J04973-1|AAA35710.1|  453|Homo sapiens protein ( Human cytochrome
           bc-1 complex core protein II mRNA, complete cds. ).
          Length = 453

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/46 (47%), Positives = 28/46 (60%)
 Frame = +1

Query: 271 KAGSRYEPQAELGXSHVLRSAAGLTTKNISSFLSQRKXSQIGAYVS 408
           KAGSRYE  + LG +H+LR  + LTTK  SSF   R    +G  +S
Sbjct: 66  KAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLS 111


>BC003136-1|AAH03136.1|  453|Homo sapiens ubiquinol-cytochrome c
           reductase core protein II protein.
          Length = 453

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/46 (47%), Positives = 28/46 (60%)
 Frame = +1

Query: 271 KAGSRYEPQAELGXSHVLRSAAGLTTKNISSFLSQRKXSQIGAYVS 408
           KAGSRYE  + LG +H+LR  + LTTK  SSF   R    +G  +S
Sbjct: 66  KAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLS 111


>BC000484-1|AAH00484.1|  453|Homo sapiens UQCRC2 protein protein.
          Length = 453

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/46 (47%), Positives = 28/46 (60%)
 Frame = +1

Query: 271 KAGSRYEPQAELGXSHVLRSAAGLTTKNISSFLSQRKXSQIGAYVS 408
           KAGSRYE  + LG +H+LR  + LTTK  SSF   R    +G  +S
Sbjct: 66  KAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLS 111


>BC046117-1|AAH46117.1|  258|Homo sapiens DNALI1 protein protein.
          Length = 258

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 32/108 (29%), Positives = 44/108 (40%)
 Frame = +1

Query: 28  REDSVNHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPXCAGSKERC*DPIKCFT 207
           R D V+ +  L   L+  +  E GI   RR LYS C+D+ +R       ER    +    
Sbjct: 96  RMDVVHLQEQLDLKLQQRQARETGICPVRRELYSQCFDELIREVTINCAER--GLLLLRV 153

Query: 208 *QXVRSXFXQRXXXXPVTXAFKAGSRYEPQAELGXSHVLRSAAGLTTK 351
              +R            + AF  G R   QAE G S + R  A L T+
Sbjct: 154 RDEIRMTIAAYQTLYESSVAF--GMRKALQAEQGKSDMERKIAELETE 199


>BC039074-1|AAH39074.1|  258|Homo sapiens DNALI1 protein protein.
          Length = 258

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 32/108 (29%), Positives = 44/108 (40%)
 Frame = +1

Query: 28  REDSVNHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPXCAGSKERC*DPIKCFT 207
           R D V+ +  L   L+  +  E GI   RR LYS C+D+ +R       ER    +    
Sbjct: 96  RMDVVHLQEQLDLKLQQRQARETGICPVRRELYSQCFDELIREVTINCAER--GLLLLRV 153

Query: 208 *QXVRSXFXQRXXXXPVTXAFKAGSRYEPQAELGXSHVLRSAAGLTTK 351
              +R            + AF  G R   QAE G S + R  A L T+
Sbjct: 154 RDEIRMTIAAYQTLYESSVAF--GMRKALQAEQGKSDMERKIAELETE 199


>AL034379-10|CAI20553.1|  280|Homo sapiens dynein, axonemal, light
           intermediate chain 1 protein.
          Length = 280

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 32/108 (29%), Positives = 44/108 (40%)
 Frame = +1

Query: 28  REDSVNHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPXCAGSKERC*DPIKCFT 207
           R D V+ +  L   L+  +  E GI   RR LYS C+D+ +R       ER    +    
Sbjct: 118 RMDVVHLQEQLDLKLQQRQARETGICPVRRELYSQCFDELIREVTINCAER--GLLLLRV 175

Query: 208 *QXVRSXFXQRXXXXPVTXAFKAGSRYEPQAELGXSHVLRSAAGLTTK 351
              +R            + AF  G R   QAE G S + R  A L T+
Sbjct: 176 RDEIRMTIAAYQTLYESSVAF--GMRKALQAEQGKSDMERKIAELETE 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,253,697
Number of Sequences: 237096
Number of extensions: 636628
Number of successful extensions: 882
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)