Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0839
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    28   0.045
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   3.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.9  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   3.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 28.3 bits (60), Expect = 0.045
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +1

Query: 184  GVNSVEGFKAQWTLQPAKYDNDVFSSCTTANTTRRWCSLSQPTPGVTAWRSDT 342
            G +S E     WT +P+ + +   +S     TT R  + ++PT   T  R  T
Sbjct: 1024 GASSTEHMHPDWTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTT 1076



 Score = 20.6 bits (41), Expect = 9.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 100  YFKIVNTQRNQYLTLSVKTTPTQNHMAYGVNSVEGFK 210
            Y++I N  RNQ   ++  T+      AY  +   GF+
Sbjct: 906  YYEICNRIRNQRWIVNRDTSGATGPFAYHGDQWVGFE 942


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +1

Query: 172 HMAYGVNSVEGFKAQWTLQPAKYDNDVFSSCT--TANTTRRWCSL 300
           HM     + EG K+Q  +  + YD+D     T    N    +C +
Sbjct: 585 HMLIPKGTPEGMKSQLFVMISNYDDDKIDQSTEGVCNDAGSYCGI 629


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 182 TGSTASKVLRPNGPCSPLSTTTTFFLHVQPRIQR 283
           TG +  ++L    P +PL   T+  L V+P + R
Sbjct: 338 TGFSPYEILYGRTPPNPLDAVTSGLLPVRPPLTR 371


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 176 WPTGSTASKVLRPNGPCSPLSTTTTFFLHVQPRIQRGVGA 295
           WP  + A++ L  N       T   F+ H +  + RG+ A
Sbjct: 538 WPRAAAAAERLWTNPSDYVKQTERRFYRHRERLVARGIHA 577



 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 351 RGHCIRTPCG 322
           R +CI+ PCG
Sbjct: 335 RSYCIQPPCG 344


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 268 TANTTRRWCSLSQPTPGVT 324
           T    R WCS SQP    T
Sbjct: 228 TLEQHRSWCSSSQPVLSTT 246


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +2

Query: 203 VLRPNGPCSPLSTTTTFFLHVQPRIQRGVGAL*ANRHLG*PHGV 334
           +L PN     L T+  + L V+PR    V  + A    G  HG+
Sbjct: 163 ILHPNIVKLKLDTSEGYTLSVKPRDGEIVANITAKTFFGARHGL 206


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 407 FIVHWNPEHIYNNEQINKQSF 469
           F+VH NP++  N ++ +  +F
Sbjct: 93  FLVHRNPKYFPNPDKFDPDNF 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,109
Number of Sequences: 336
Number of extensions: 2659
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)