Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0839
         (538 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145664-1|AAD38639.1|  793|Drosophila melanogaster BcDNA.GH1111...    28   7.0  
AE013599-555|AAF59160.1|  793|Drosophila melanogaster CG2910-PB,...    28   7.0  
AE013599-554|AAM68878.1|  793|Drosophila melanogaster CG2910-PA,...    28   7.0  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    28   9.3  

>AF145664-1|AAD38639.1|  793|Drosophila melanogaster BcDNA.GH11110
           protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 408 KAVLRKPLYPKRTARDFRPRGHCIRTP 328
           K  + +P+Y   T  ++RPRGH +  P
Sbjct: 167 KMAIVEPVYKSTTRPEYRPRGHSMSPP 193


>AE013599-555|AAF59160.1|  793|Drosophila melanogaster CG2910-PB,
           isoform B protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 408 KAVLRKPLYPKRTARDFRPRGHCIRTP 328
           K  + +P+Y   T  ++RPRGH +  P
Sbjct: 167 KMAIVEPVYKSTTRPEYRPRGHSMSPP 193


>AE013599-554|AAM68878.1|  793|Drosophila melanogaster CG2910-PA,
           isoform A protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 408 KAVLRKPLYPKRTARDFRPRGHCIRTP 328
           K  + +P+Y   T  ++RPRGH +  P
Sbjct: 167 KMAIVEPVYKSTTRPEYRPRGHSMSPP 193


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 161 RPKTTWPTGSTASKVLRPNGPCSPLSTTTT 250
           RP TT P  +T +   RP    +P STTTT
Sbjct: 378 RPTTTTPRSTTTTSTSRPT-TTTPRSTTTT 406



 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 161 RPKTTWPTGSTASKVLRPNGPCSPLSTTTT 250
           RP TT P  +T +   RP    +P STTTT
Sbjct: 410 RPTTTTPRSTTTTSTSRPT-TTTPRSTTTT 438


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,361,396
Number of Sequences: 53049
Number of extensions: 500773
Number of successful extensions: 1540
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)