Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0836
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.71 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   6.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 78   TATPPPSKVAPQCGKPANAAPTKRYL 155
            T  PPP+ V P+  KP+      +Y+
Sbjct: 1084 TTIPPPAVVMPEVDKPSQPCEPGQYV 1109


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -1

Query: 528 VQIMTRRVGYMSQWVESSSRICFVAGL*RGNSRVRNRQYF 409
           V ++   VG+   +V  +S + F+  L +     + R YF
Sbjct: 15  VSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYF 54


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 90  PPSKVAPQCGKPANAAPTKRYLLSIGRIFH 179
           P + +A QC K +N +P      ++G+ FH
Sbjct: 36  PLAMLAAQCNKLSNKSPPPLADAAVGKGFH 65


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -1

Query: 528 VQIMTRRVGYMSQWVESSSRICFVAGL*RGNSRVRNRQYF 409
           V ++   VG+   +V  +S + F+  L +     + R YF
Sbjct: 248 VSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYF 287


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -1

Query: 528 VQIMTRRVGYMSQWVESSSRICFVAGL*RGNSRVRNRQYF 409
           V ++   VG+   +V  +S + F+  L +     + R YF
Sbjct: 248 VSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYF 287


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 256 LPLSFPRTEPRHVRGVV 306
           L   FP T+P+ +RG +
Sbjct: 145 LAWEFPETKPKKIRGKI 161


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 91  HHPKWPHSAGNQPTQHP 141
           HH +W +S  N   Q+P
Sbjct: 72  HHGQWNYSPDNHFEQYP 88


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 188 RKFVEDPPNREQITLGGCCVGW 123
           RK ++DP  R Q+ +    VGW
Sbjct: 264 RKNLKDPCRRRQMYVDFGSVGW 285


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 80   GDSPTIQSGPTVRE 121
            GD  T+Q GPTV +
Sbjct: 1438 GDWETVQIGPTVEK 1451


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,730
Number of Sequences: 336
Number of extensions: 3924
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)