Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0835
         (510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.7  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   4.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   4.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 323 PENAAYYGNRSACYMMLCMYKKAL 394
           P N  YY + + CY  L M  K L
Sbjct: 34  PTNQKYYPSLAKCYACLLMVVKIL 57


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 69  LIHLSPEFRCLF 104
           LIHL  E+RC+F
Sbjct: 273 LIHLLQEYRCIF 284


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 260 NNTTVFFFLQPGSPGFWV 207
           NN  V   L+  +PGFW+
Sbjct: 651 NNGYVVLRLRANNPGFWL 668


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 337 CCIFWAQFNGFIIHGQCS 284
           C +FW  +NG     QCS
Sbjct: 108 CDVFWNCWNGEASRYQCS 125


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 337 CCIFWAQFNGFIIHGQCS 284
           C +FW  +NG     QCS
Sbjct: 108 CDVFWNCWNGEASRYQCS 125


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 260 NNTTVFFFLQPGSPGFWV 207
           NN  V F  +  +PG+W+
Sbjct: 651 NNGYVIFRFRADNPGYWL 668


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,198
Number of Sequences: 336
Number of extensions: 2491
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)