Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0835
(510 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 93 2e-19
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 60 1e-09
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 54 9e-08
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 53 1e-07
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 47 1e-05
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 46 2e-05
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 44 7e-05
SB_48397| Best HMM Match : TPR_2 (HMM E-Value=6.6e-26) 43 2e-04
SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34) 39 0.003
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 37 0.011
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_49732| Best HMM Match : TPR_1 (HMM E-Value=4.2) 34 0.078
SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36) 33 0.10
SB_13361| Best HMM Match : TPR_2 (HMM E-Value=0.0021) 33 0.10
SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20) 32 0.24
SB_459| Best HMM Match : Ank (HMM E-Value=3.9e-30) 31 0.73
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 30 0.96
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.96
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 30 0.96
SB_11617| Best HMM Match : TPR_1 (HMM E-Value=0) 28 5.1
SB_9147| Best HMM Match : Sushi (HMM E-Value=0) 28 5.1
SB_42304| Best HMM Match : NHL (HMM E-Value=0) 27 6.8
SB_37928| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_29141| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_21381| Best HMM Match : TPR_1 (HMM E-Value=0) 27 6.8
SB_40569| Best HMM Match : TPR_2 (HMM E-Value=2.8e-34) 27 9.0
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_29789| Best HMM Match : TPR_2 (HMM E-Value=1.8e-16) 27 9.0
SB_16367| Best HMM Match : TPR_1 (HMM E-Value=0) 27 9.0
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 92.7 bits (220), Expect = 2e-19
Identities = 44/94 (46%), Positives = 59/94 (62%)
Frame = +2
Query: 227 LAEEKKRQWYYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQ 406
LAE KK + Y KNY A+A+Y +AI+ P A +YGNRSA YMM+ Y KALEDA
Sbjct: 33 LAEAKKAEGNREYGLKNYVSAIALYSKAIEFAPHVATFYGNRSAAYMMISNYDKALEDAL 92
Query: 407 KAVSLXPTFTKGYIRAAKCCIALGDLLNGEQAVR 508
++ + F KG+ RAAKC +A+G N + +R
Sbjct: 93 LSIEIDNNFVKGHYRAAKCHLAMGSASNALREIR 126
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 69.3 bits (162), Expect = 2e-12
Identities = 38/88 (43%), Positives = 49/88 (55%)
Frame = +2
Query: 215 SPESLAEEKKRQWYYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKAL 394
S E AE+ K + +K NY A+ Y +AI+L + AYYGNRS CY+ Y AL
Sbjct: 182 SLEKEAEDLKLKANGYFKEGNYNSAITFYTQAIELKADVPAYYGNRSFCYLKTEYYGLAL 241
Query: 395 EDAQKAVSLXPTFTKGYIRAAKCCIALG 478
DA KA+ L + KGY R A +ALG
Sbjct: 242 ADANKAIQLDRKYIKGYYRRATANMALG 269
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = +2
Query: 275 NYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIRA 454
NY+ A+ ++ +AIKL + ++GNRS C+ L ++KAL+DA A+SL P + KG+ R
Sbjct: 284 NYQAAIELFTQAIKLDARDFRFFGNRSYCFDRLGQFEKALQDADVAISLAPDWPKGFFRR 343
Query: 455 AKCCIAL 475
+ L
Sbjct: 344 GRALAGL 350
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 57.6 bits (133), Expect = 6e-09
Identities = 27/55 (49%), Positives = 34/55 (61%)
Frame = +2
Query: 287 ALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIR 451
A+ Y EAI L P N +Y NRSA + L Y +ALEDA+K V + P + KGY R
Sbjct: 28 AIEFYTEAILLDPANHVFYSNRSAAFAKLSKYNEALEDARKCVEIKPDWGKGYSR 82
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +2
Query: 218 PESLAEEKKRQWYYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALE 397
P AEEK++ Y +K ++ A Y EAIK PE+A Y NR+A + L + ALE
Sbjct: 362 PVKSAEEKEKGNEY-FKKGDFPSAQKHYTEAIKRNPEDAKLYSNRAATFQKLAAFNLALE 420
Query: 398 DAQKAV 415
+A++ +
Sbjct: 421 EAKEGL 426
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 53.6 bits (123), Expect = 9e-08
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +2
Query: 275 NYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIRA 454
+++ A+ +Y EAIKL P N YGNRSA + ++ALED +KA L P + K + R
Sbjct: 37 DFQKAVELYSEAIKLDPNNHVLYGNRSAACIRTWQLEQALEDGKKAAELNPLWPKAHYRQ 96
Query: 455 AKCCIALG 478
+G
Sbjct: 97 GVALQCMG 104
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +2
Query: 230 AEEKKRQWYYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQK 409
+E++K Q + YK A++ Y AI P N YGNR+ Y+ ++ L D ++
Sbjct: 500 SEDRKLQGNDHFNHGKYKAAISAYTLAISGAPYNHILYGNRAQSYLKSEDLREGLTDGRR 559
Query: 410 AVSLXPTFTKGYIRAAKCCIALG 478
AV L P +TKG R A+ LG
Sbjct: 560 AVVLKPDWTKGQFRYAQAFFELG 582
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Frame = +2
Query: 215 SPESLAEEKKRQWYYLYKFKNYKGALAMYDEAIKLCP-EN----AAYYGNRSACYMMLCM 379
+P A+ K + +K Y+ A+ Y EAI+LCP EN + +Y NR+A Y +
Sbjct: 136 TPSEQAQVAKLKGNKYFKGCKYEQAIKCYTEAIELCPPENKQDLSTFYQNRAAAYEQMNQ 195
Query: 380 YKKALEDAQKAVSLXPTFTKGYIRAAK 460
++ +E+A KA+ L +TK +R A+
Sbjct: 196 FENVVEEATKALELNSKYTKALMRRAR 222
>SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 287 ALAMYDEAIKLCPENAAYYGNRSACYMMLCM---YKKALEDAQKAVSLXPTFTKGYIRAA 457
A+ MY+EA+ L P +A Y NR+A ++ AL D KA++L P TK + R A
Sbjct: 353 AVNMYNEALNLAPNSAVLYANRAAAFIKRSWEGDVYAALRDCHKALTLDPNHTKAHFRQA 412
Query: 458 KCCIAL 475
+C L
Sbjct: 413 RCLYEL 418
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Frame = +2
Query: 215 SPESLAEEKKRQWYYLYKFKNYKGALAMYDEAIKLCP----------ENAAYYGNRSACY 364
+P+S E K+ Y +K +Y+ AL+ Y A+KL E A Y NR+AC
Sbjct: 5 NPKSAVEIKEEGNKY-FKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQ 63
Query: 365 MMLCMYKKALEDAQKAVSLXPTFTKGYIRAAKCCIALGDL 484
+ L Y+ A++DA KA+ + P K R ++ A G L
Sbjct: 64 LKLEKYEAAIKDATKALDIVPNDPKALFRRSQAFEATGRL 103
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +2
Query: 233 EEKKRQWYYLYKFKNYKGALAMYDEAIKLCPEN----AAYYGNRSACYMMLCMYKKALED 400
+ KK++ + +Y+ A +Y EA+++ P+N A Y NR+ L +A+ED
Sbjct: 34 QAKKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIED 93
Query: 401 AQKAVSLXPTFTKGYIRAAKC 463
+A++L T+TK Y++ A C
Sbjct: 94 CTQAMNLDHTYTKAYLKRANC 114
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +2
Query: 233 EEKKRQWYYLYKFKNYKGALAMYDEAIKLCPEN----AAYYGNRSACYMMLCMYKKALED 400
+ KK++ + +Y+ A +Y EA+++ P+N A Y NR+ L +A+ED
Sbjct: 34 QAKKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIED 93
Query: 401 AQKAVSLXPTFTKGYIRAAKC 463
+A++L T+TK Y++ A C
Sbjct: 94 CTQAMNLDHTYTKAYLKRANC 114
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +2
Query: 260 LYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTK 439
L+K + Y+ AL Y A++L P + RS CY+ L A DA+ A+ F K
Sbjct: 26 LFKQEEYQKALDSYSLALELKPTDPFCLVARSKCYLKLGKNDAAYRDAEAALEEDKDFNK 85
Query: 440 GYIRAAKCCIALGD 481
G + A+ A+GD
Sbjct: 86 GLYQKAEALYAMGD 99
>SB_48397| Best HMM Match : TPR_2 (HMM E-Value=6.6e-26)
Length = 598
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +2
Query: 290 LAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIRAAKCCI 469
+A Y EA+++ P++ G RSA Y L M+ +A +DA + ++ P KGY A
Sbjct: 2 IAYYSEALEIEPDDEDVLGCRSAVYTKLGMFNEARKDADRLIANVPDKPKGYFLQAAALQ 61
Query: 470 ALGD 481
LG+
Sbjct: 62 NLGN 65
>SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34)
Length = 935
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +2
Query: 299 YDEAIKLCPENA-----AYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIRAAKC 463
Y AI PE+ A NR Y+ Y +AL DA+K V+ P + K Y R + C
Sbjct: 687 YSLAINYSPESCSEMRGALLSNRCLIYLNTYQYDEALADAKKCVASRPGWFKAYYRLSCC 746
Query: 464 CIALG 478
ALG
Sbjct: 747 LKALG 751
Score = 33.5 bits (73), Expect = 0.10
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 347 NRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIRAAKC 463
NRS ++ K AL DA++ V P+++KG+ R C
Sbjct: 442 NRSLAFLKKNFLKSALTDAKECVKTRPSWSKGHYRLGSC 480
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = +2
Query: 308 AIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIRAAKCCIALGDL 484
AIK P A Y N + K AL + + AV L P F GYI A +A GDL
Sbjct: 107 AIKQNPMLAEAYSNLGNVFKERGQLKDALANYRHAVKLKPDFIDGYINLAAALVAAGDL 165
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 287 ALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIRAAKCC 466
A+A Y A+ L P +A +GN + Y + A++ ++A+ L P F Y A
Sbjct: 247 AVAAYLRALNLSPNHAVVHGNLACVYYEQGLIDLAVDTYRRAIELQPNFPDAYCNLANAL 306
Query: 467 IALGDLLNGEQ 499
G + E+
Sbjct: 307 KEQGKVSEAEE 317
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +2
Query: 260 LYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTK 439
L + ++ +GA+ Y AI++ P A + N ++ + +A++ + A+ L P+F
Sbjct: 408 LKEMQDIQGAIQCYSRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTALKLKPSFPD 467
Query: 440 GYIRAAKC 463
Y A C
Sbjct: 468 AYCNLAHC 475
>SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 503
Score = 36.7 bits (81), Expect = 0.011
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 275 NYKGALAMYDEAIKLCPENAAYYGNRSA-CYMMLCMYKKALEDAQKAVSLXP 427
NYK ALA Y++A+K P++ R+A CY M + KKALE Q A+ P
Sbjct: 55 NYKQALACYNQALKHNPDDPTILWERAAVCYQMGDV-KKALEYYQVALKAFP 105
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 35.5 bits (78), Expect = 0.026
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +2
Query: 266 KFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGY 445
K + ++ AL Y + I+L + + NR+ C++ L K+AL D + + L F K
Sbjct: 876 KREEFQEALDWYTKGIELTKTDHRLFSNRALCHLKLNKPKEALADCESCLKLEEHFGKAL 935
Query: 446 IRAA 457
R A
Sbjct: 936 QRKA 939
>SB_49732| Best HMM Match : TPR_1 (HMM E-Value=4.2)
Length = 32
Score = 33.9 bits (74), Expect = 0.078
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 347 NRSACYMMLCMYKKALEDAQKAVSLXPTFTK 439
NRSA + L Y +ALEDA+K V + P + K
Sbjct: 2 NRSAAFAKLSKYNEALEDARKCVEIKPDWGK 32
>SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)
Length = 1021
Score = 33.5 bits (73), Expect = 0.10
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +2
Query: 287 ALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIRAAKCC 466
AL +Y++ ++L P+++ Y R+ CY+ + AL D A+ + P + +
Sbjct: 385 ALDVYNDVVRLRPKSSRSYCARAVCYLNSGSNEAALSDYNTALGIQPGCARSLCGRMRAH 444
Query: 467 IALG 478
A+G
Sbjct: 445 FAIG 448
>SB_13361| Best HMM Match : TPR_2 (HMM E-Value=0.0021)
Length = 304
Score = 33.5 bits (73), Expect = 0.10
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +2
Query: 212 KSPESLAEEKKRQWYYLYKFKNYKGALAMYDEAIKL-CPE---NAAYYGNRSACYMMLCM 379
++P A K + Y YK KN+K A+ Y E IKL C + NA Y NR+ L +
Sbjct: 78 ENPVENALSYKEEGNYEYKRKNFKKAIDAYTEGIKLRCQDGHVNAILYTNRATVNFSLVI 137
Query: 380 YKKALEDAQKAVSLXP 427
+ + + ++ P
Sbjct: 138 QQNLCKFSLITTNIEP 153
>SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20)
Length = 1195
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 275 NYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXP 427
N GAL Y+EAIK+ P+ A + R M L + K + D +A+++ P
Sbjct: 1093 NDSGALDAYNEAIKVNPDYAEAFYQRGLTKMKL-SHTKGVHDFNRALAINP 1142
>SB_459| Best HMM Match : Ank (HMM E-Value=3.9e-30)
Length = 323
Score = 30.7 bits (66), Expect = 0.73
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 332 AAYYGNRSACYMML--CMYKKALEDAQKAVSLXPTFTKGYIRAAK 460
AA++GN A +M+ C Y+ +D+ A L G+IR AK
Sbjct: 142 AAFHGNEQAVKLMIDRCQYEADEKDSCGATPLMDALRSGHIRVAK 186
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 30.3 bits (65), Expect = 0.96
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 302 DEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIR 451
D A K+ Y N +AC + L Y A+ED +A+ L K R
Sbjct: 30 DNAKKMAAIALPCYLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFR 79
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 30.3 bits (65), Expect = 0.96
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 212 KSPESLAEEKKRQWYYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRS 355
K E++A + K + +K + Y+ A+ +Y +A+ N A+Y NR+
Sbjct: 114 KQREAVALQLKEKGNLAFKQQKYEEAVKLYTQALNQDRTNTAFYTNRA 161
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 30.3 bits (65), Expect = 0.96
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 302 DEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYIR 451
D A K+ Y N +AC + L Y A+ED +A+ L K R
Sbjct: 357 DNAKKMAAIALPCYLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFR 406
>SB_11617| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 318
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 242 KRQWYYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSL 421
+ Q Y NY+ AL+++ + C + AY G + Y+ A+ + Q+A+SL
Sbjct: 46 RSQGKYEDTLNNYQHALSLFQKTDDECGQAKAYLG-MGGVHKSQGKYEDAINNCQRALSL 104
>SB_9147| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1656
Score = 27.9 bits (59), Expect = 5.1
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +2
Query: 278 YKGALAMYDEAIKLCPENAAYYGNRSACYMMLC 376
Y+ + + +++C EN + G + CY++ C
Sbjct: 1276 YEKGMLLAGSPVRVCQENGKWSGTQPRCYLLDC 1308
>SB_42304| Best HMM Match : NHL (HMM E-Value=0)
Length = 1279
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 369 CYACIRRLLKMHRKLYHWXQHSPK 440
C C RRL ++ R LY H PK
Sbjct: 495 CRLCFRRLYRLVRWLYRCGMHCPK 518
>SB_37928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = +3
Query: 315 NCAQKMQHITATDLHVT*CYACIRRLLKMHRKLYHWXQHSPKXTYG 452
+C +K + + +L C AC ++ HW +H YG
Sbjct: 119 HCQKKEELLGIVELTFKSCKACFTHYCSPECRILHWPEHRLDCQYG 164
>SB_29141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1331
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +2
Query: 227 LAEEKKRQWYYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQ 406
+ + + Q Y NY+ AL+++ + C + AY+G + + Y+ AL + Q
Sbjct: 434 MGDAHRSQGKYEDAMNNYQHALSLFQKTGDECVQAKAYHGMGNV-HFNHGKYEDALNNYQ 492
Query: 407 KAVSL 421
A+SL
Sbjct: 493 HALSL 497
>SB_21381| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 316
Score = 27.5 bits (58), Expect = 6.8
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +2
Query: 248 QWYYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLXP 427
Q Y NY+ AL+++ + C + AY G + + Y+ A+ + Q A+SL
Sbjct: 43 QGKYEDAMNNYQHALSLFQKTGDECGQANAYLGMGNV-HWFQGKYEDAMNNYQHALSLFQ 101
Query: 428 TFTKGYIRAAKCCIALGDL 484
T G AK + +G++
Sbjct: 102 K-TGGESGQAKAYLGMGNV 119
>SB_40569| Best HMM Match : TPR_2 (HMM E-Value=2.8e-34)
Length = 330
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 272 KNYKGALAMYDEAIKLCPE-NAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYI 448
++YK ALA Y +A++ P A C++ L KA ++A+ L P T +
Sbjct: 10 RDYKNALAFYKKALRTNPNCPGAVRLGMGHCFVKLNKLDKARLAFKRALELEPRCTGAMV 69
Query: 449 RAA 457
A
Sbjct: 70 GLA 72
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 272 KNYKGALAMYDEAIKLCPE-NAAYYGNRSACYMMLCMYKKALEDAQKAVSLXPTFTKGYI 448
++YK ALA Y +A++ P A C++ L KA ++A+ L P T +
Sbjct: 145 RDYKNALAFYKKALRTNPNCPGAVRLGMGHCFVKLNKLDKARLAFKRALELEPRCTGAMV 204
Query: 449 RAA 457
A
Sbjct: 205 GLA 207
>SB_29789| Best HMM Match : TPR_2 (HMM E-Value=1.8e-16)
Length = 551
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 275 NYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSL 421
NY+ AL+++ + C + AY G + Y+ A+ + Q+A+SL
Sbjct: 43 NYQHALSLFQKTDDECGQAKAYLG-MGGVHKSQGKYEDAINNCQRALSL 90
>SB_16367| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 635
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 242 KRQWYYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSL 421
K Q Y NY+ AL+++ + C + AY G + Y+ L + Q A+SL
Sbjct: 349 KSQGKYEDALNNYQHALSLFQKTDDECGQAKAYLG-MGGVHKSQAKYEDELNNYQHALSL 407
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,986,569
Number of Sequences: 59808
Number of extensions: 283793
Number of successful extensions: 664
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1123894172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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