BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0834 (422 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 27 0.91 SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 6.4 >SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pombe|chr 2|||Manual Length = 1692 Score = 27.5 bits (58), Expect = 0.91 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = -2 Query: 301 RAFFVKRGTKFLVHVLYIDNKL*FNAYKTFLLI 203 + FF+ T++LV++ Y+D L +N + TF LI Sbjct: 513 KLFFLPHSTRYLVNLTYLD--LSYNNFVTFPLI 543 >SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces pombe|chr 1|||Manual Length = 4924 Score = 24.6 bits (51), Expect = 6.4 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +3 Query: 270 NFVPLFTKNARMEEYEISLILIENIEKE-CTMIIFFFKYCIK 392 + + LF K A I+L + N++KE FF +Y IK Sbjct: 1751 DIITLFEKEANEHPSSIALHFVYNVDKENIYSYKFFSEYSIK 1792 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,736,573 Number of Sequences: 5004 Number of extensions: 35001 Number of successful extensions: 58 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 58 length of database: 2,362,478 effective HSP length: 66 effective length of database: 2,032,214 effective search space used: 150383836 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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