Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0834
(422 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_23170| Best HMM Match : Peptidase_A17 (HMM E-Value=1.6e-10) 28 2.8
SB_18524| Best HMM Match : Peptidase_A17 (HMM E-Value=8.3e-21) 28 2.8
SB_12637| Best HMM Match : rve (HMM E-Value=3.7e-22) 28 2.8
SB_49811| Best HMM Match : rve (HMM E-Value=4.4e-22) 28 2.8
SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14) 28 3.7
SB_21435| Best HMM Match : DUF846 (HMM E-Value=4.3e-35) 28 3.7
SB_9085| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_45589| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-11) 27 6.4
SB_21747| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-11) 27 6.4
>SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 29.9 bits (64), Expect = 0.91
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -1
Query: 176 DHIIVFS*IFACLKLHLRMALRFLIGIRLFNYVPDHENHRVFEKSEII 33
+HI+ S IF C + LR ++ LF+ V ++ N R+ +I
Sbjct: 373 NHILCSSCIFPCASIFLRFLCPAIMSPSLFHLVQEYPNERILRTLTLI 420
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 37 ISDFSNTLWFSWSGT*LNNRIPIKNLRAIRKCSFKHAKI 153
+S+ + WF W+G N +IP +R +R+ H +
Sbjct: 658 VSESTKKAWFKWTGQLRNVKIPRSLVRDLRRVKTIHLHV 696
>SB_23170| Best HMM Match : Peptidase_A17 (HMM E-Value=1.6e-10)
Length = 342
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 37 ISDFSNTLWFSWSGT*LNNRIPIKNLRAIRKCSFKHAKI 153
+S+ + WF W+G N +IP +R +R+ H +
Sbjct: 259 VSESTKKAWFKWTGQLRNVKIPRSLVRDLRRVKTIHLHV 297
>SB_18524| Best HMM Match : Peptidase_A17 (HMM E-Value=8.3e-21)
Length = 620
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 37 ISDFSNTLWFSWSGT*LNNRIPIKNLRAIRKCSFKHAKI 153
+S+ + WF W+G N +IP +R +R+ H +
Sbjct: 150 VSESTKKAWFKWTGQLRNVKIPRSLVRDLRRVKTIHLHV 188
>SB_12637| Best HMM Match : rve (HMM E-Value=3.7e-22)
Length = 1072
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 37 ISDFSNTLWFSWSGT*LNNRIPIKNLRAIRKCSFKHAKI 153
+S+ + WF W+G N +IP +R +R+ H +
Sbjct: 483 VSESTKKAWFKWTGQLRNVKIPRSLVRDLRRVKTIHLHV 521
>SB_49811| Best HMM Match : rve (HMM E-Value=4.4e-22)
Length = 664
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 37 ISDFSNTLWFSWSGT*LNNRIPIKNLRAIRKCSFKHAKI 153
+S+ + WF W+G N +IP +R +R+ H +
Sbjct: 28 VSESTKKAWFKWTGQLRNVKIPRSLVRDLRRVKTIHLHV 66
>SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)
Length = 867
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 8 YLMFFIVIILFLTFRILYGFRGQEHS*IIGFQLKTLGPSVNVVLNTRKSKKIL 166
YL+ VI++FL R LY ++HS I + K P+VN + + K +L
Sbjct: 639 YLLCLCVIMVFLHLR-LYRI-SRKHSIAIAAENKRFDPAVNTLSERKALKTVL 689
>SB_21435| Best HMM Match : DUF846 (HMM E-Value=4.3e-35)
Length = 323
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -1
Query: 113 RFLIGIRLFNYV-PDHENHRVFEKSEII 33
R L+G+R +NYV D +H VFE +++
Sbjct: 234 RLLVGLRWWNYVDEDGNSHWVFESKKLL 261
>SB_9085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 37 ISDFSNTLWFSWSGT*LNNRIPIKNLRAIRKCSFKH 144
+S+ + WF W+G N +IP +R +R+ H
Sbjct: 528 VSESTKKAWFKWTGQLRNVKIPRSLVRDLRRVKTIH 563
>SB_45589| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-11)
Length = 293
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 37 ISDFSNTLWFSWSGT*LNNRIPIKNLRAIRKCSFKHAKI 153
+S+ WF W+G N +IP +R +R+ H +
Sbjct: 209 VSESIKKAWFKWTGQLRNVKIPRSLVRDLRRVKTIHLHV 247
>SB_21747| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-11)
Length = 234
Score = 27.1 bits (57), Expect = 6.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 37 ISDFSNTLWFSWSGT*LNNRIPIKNLRAIRK 129
+S+ + WF W+G N +IP +R +R+
Sbjct: 150 VSESTKKAWFKWTGQLRNVKIPRSLVRDLRR 180
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,849,388
Number of Sequences: 59808
Number of extensions: 227205
Number of successful extensions: 587
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 801830705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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