Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0834
         (422 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical ...    29   1.4  
Z70037-1|CAA93878.1|  493|Caenorhabditis elegans Hypothetical pr...    27   7.3  
AF125959-3|AAD14731.1|  531|Caenorhabditis elegans Udp-glucurono...    26   9.7  

>AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical
           protein Y39E4B.10 protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 395 IFYAIFKKKYYHCALLLYILYKYKGNFIFLHPRIFRKKGYK 273
           IF  IFKK YYH   + +       NF ++  +I  KK +K
Sbjct: 306 IFLNIFKKNYYHIRKIRFF------NFFYISKKILTKKFFK 340


>Z70037-1|CAA93878.1|  493|Caenorhabditis elegans Hypothetical
           protein T27D12.1 protein.
          Length = 493

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = +2

Query: 5   FYLMFFIVIILFLTFRILYGFRGQEHS*IIGFQLKTLGPSVNVVLNTRKSKKI 163
           FY    + ++LF+T+ + Y    Q+H  +   +LK +       ++ R  KK+
Sbjct: 200 FYAHGAVSLLLFVTYALFYRNSPQKHPFVGNVELKKISIGKIAAVDKRALKKV 252


>AF125959-3|AAD14731.1|  531|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein14 protein.
          Length = 531

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 170 IIVFS*IFACLKLHLRMALRFLIGIRLFNYVPDHENH 60
           II F  +FACL L+L   L F    ++F +VP    H
Sbjct: 498 IIAFFILFACLALYLFTNLIF----KIFRFVPKKTKH 530


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,281,170
Number of Sequences: 27780
Number of extensions: 186042
Number of successful extensions: 352
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)