BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0833 (603 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_17426| Best HMM Match : DUF292 (HMM E-Value=0) 111 3e-25 SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 29 2.9 SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9 SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 29 3.8 SB_19633| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1 SB_25932| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1 SB_6446| Best HMM Match : DENN (HMM E-Value=2.2) 28 6.7 SB_36211| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.8 SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8 SB_9750| Best HMM Match : rve (HMM E-Value=1.2e-37) 27 8.8 SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.8 SB_2069| Best HMM Match : Glyco_hydro_20 (HMM E-Value=7.9e-14) 27 8.8 >SB_17426| Best HMM Match : DUF292 (HMM E-Value=0) Length = 249 Score = 111 bits (268), Expect = 3e-25 Identities = 54/116 (46%), Positives = 79/116 (68%) Frame = +2 Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433 REDY+VEA+E++E+YCDL+LARFGL+ M DEG+ E++++LIWVAPR+ TDVQE K+I Sbjct: 61 REDYLVEALELLELYCDLLLARFGLIETMTYCDEGMIESVTSLIWVAPRLQTDVQEFKVI 120 Query: 434 SDLLTAKYGKGVC*CM*RRECEHNKDKLKHQMSVHSPPKILVENISLEIC*DYHVE 601 ++ L K+GK + +L ++S PPKILVE +EI ++V+ Sbjct: 121 AEQLGYKFGKTFAHEAATNANDTVNPRLILKLSPKPPPKILVERYLIEIARSHNVQ 176 Score = 64.1 bits (149), Expect = 8e-11 Identities = 31/51 (60%), Positives = 38/51 (74%) Frame = +3 Query: 102 KLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254 KLKT+LRLAINR AQK+R+EIA+Y+ +GK ERA+IRVEHII Sbjct: 10 KLKTNLRLAINRLKLLEKKKTELAQKARREIADYLGNGKDERARIRVEHII 60 >SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) Length = 2182 Score = 29.1 bits (62), Expect = 2.9 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = -1 Query: 447 VSKSDIIFNSCTSVCILGATHIRVDIASARPSS---SSFI*VTRPNLA 313 + +D SC+ V GAT I +D RPSS S F +T+P +A Sbjct: 625 IGVTDATTTSCSFVKGQGATRIELDQVEVRPSSQKKSRFSLITKPAVA 672 >SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 266 Score = 29.1 bits (62), Expect = 2.9 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 Query: 53 KKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEE 157 KKL +N+ F +LH+ + FE S+ P EE Sbjct: 83 KKLRRNRTTFTTFQLHELERAFEKSHYPDVYTREE 117 >SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) Length = 646 Score = 28.7 bits (61), Expect = 3.8 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -1 Query: 471 HTPFPYFAVSKSDIIFNSCTSVCILGATHIRVDIASARPSSSSF 340 HT F + + I+FN+C C A+H+ VD + A S + F Sbjct: 252 HTTFAHNVSFEGAILFNTCFYGCEF-ASHVVVDFSGADISGADF 294 >SB_19633| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 93 Score = 28.3 bits (60), Expect = 5.1 Identities = 12/70 (17%), Positives = 36/70 (51%) Frame = -3 Query: 538 VHRHLVLQFVLIVFTFSPLHASAYTFSIFCSEQVRYYF*FLYICVHPRSYPYQSGYSFSK 359 ++ ++ + + ++T++ + YT++ + Y + ++Y+ V+ Y Y Y + Sbjct: 15 IYIYIYIYIYIYIYTYTYTYTYTYTYTYTYTYTYTYTYTYVYVYVYVYVYVYVYVYVYVY 74 Query: 358 TFIEFLHLSD 329 +I +++L D Sbjct: 75 VYI-YIYLYD 83 Score = 27.5 bits (58), Expect = 8.8 Identities = 13/56 (23%), Positives = 28/56 (50%) Frame = -3 Query: 499 FTFSPLHASAYTFSIFCSEQVRYYF*FLYICVHPRSYPYQSGYSFSKTFIEFLHLS 332 +T++ + YT++ + Y + ++Y+ V+ Y Y Y + I +LH+S Sbjct: 36 YTYTYTYTYTYTYTYTYTYVYVYVYVYVYVYVYVYVYVYVYIYIYLYDSIAYLHIS 91 >SB_25932| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 401 Score = 28.3 bits (60), Expect = 5.1 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = -3 Query: 511 VLIVFTFSPLHA-SAYTFSIFCSEQVRYYF*FLYICVHPRSYPYQSGYSFSK 359 + I+FT PL A SA S CS + R L H + P+Q SK Sbjct: 187 IQIIFTILPLAAISALVMSSICSFRKRQAQDILLCVSHDNTIPFQDNIRMSK 238 >SB_6446| Best HMM Match : DENN (HMM E-Value=2.2) Length = 492 Score = 27.9 bits (59), Expect = 6.7 Identities = 14/52 (26%), Positives = 29/52 (55%) Frame = -3 Query: 418 LYICVHPRSYPYQSGYSFSKTFIEFLHLSDKTKPS*YQVTVHFYYFHSLYHV 263 L++C HP + + + Y++++T LHL T+P+ ++ Y +L H+ Sbjct: 57 LHLCTHPTTLMHATYYTYART---LLHLC--TQPTTLMHAPYYTYARTLLHL 103 Score = 27.9 bits (59), Expect = 6.7 Identities = 17/74 (22%), Positives = 34/74 (45%) Frame = -3 Query: 484 LHASAYTFSIFCSEQVRYYF*FLYICVHPRSYPYQSGYSFSKTFIEFLHLSDKTKPS*YQ 305 LH ++ + Y L++C HP + + Y++++T LHL +T P+ Sbjct: 79 LHLCTQPTTLMHAPYYTYARTLLHLCTHPTTLMHAPYYTYART---LLHL--RTHPTTLM 133 Query: 304 VTVHFYYFHSLYHV 263 ++ Y +L H+ Sbjct: 134 HAPYYTYARNLLHL 147 >SB_36211| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 1020 Score = 27.5 bits (58), Expect = 8.8 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -1 Query: 69 FLNNFLAIIFVIPTNQKNKWTDA 1 F LA++ +P NQK+KW D+ Sbjct: 667 FNQTLLAMLRTLPENQKSKWKDS 689 >SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1551 Score = 27.5 bits (58), Expect = 8.8 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -1 Query: 69 FLNNFLAIIFVIPTNQKNKWTDA 1 F LA++ +P NQK+KW D+ Sbjct: 367 FNQTLLAMLRTLPENQKSKWKDS 389 >SB_9750| Best HMM Match : rve (HMM E-Value=1.2e-37) Length = 280 Score = 27.5 bits (58), Expect = 8.8 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -1 Query: 69 FLNNFLAIIFVIPTNQKNKWTDA 1 F LA++ +P NQK+KW D+ Sbjct: 141 FNQTLLAMLRTLPENQKSKWKDS 163 >SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 1623 Score = 27.5 bits (58), Expect = 8.8 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -1 Query: 69 FLNNFLAIIFVIPTNQKNKWTDA 1 F LA++ +P NQK+KW D+ Sbjct: 1484 FNQTLLAMLRTLPENQKSKWKDS 1506 >SB_2069| Best HMM Match : Glyco_hydro_20 (HMM E-Value=7.9e-14) Length = 403 Score = 27.5 bits (58), Expect = 8.8 Identities = 18/73 (24%), Positives = 35/73 (47%) Frame = -1 Query: 561 STNILGGLCTDIWCFNLSLLCSHSRLYMHQHTPFPYFAVSKSDIIFNSCTSVCILGATHI 382 S +IL G+ D++ FN + H R Y++ +F + SC C + Sbjct: 307 SHDILAGIRRDVYEFNFANFIKHERSYLNVTALVSHFVEGE-----QSCVKKCKDNKACL 361 Query: 381 RVDIASARPSSSS 343 +++A A+P+S++ Sbjct: 362 SINMA-AQPNSNA 373 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,736,575 Number of Sequences: 59808 Number of extensions: 354031 Number of successful extensions: 862 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 854 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1463691625 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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