Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0833
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 117 6e-27
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 117 6e-27
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 117 6e-27
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 117 6e-27
U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis... 29 2.6
U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine rece... 29 2.6
U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis... 29 2.6
Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 29 3.4
Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 27 7.8
U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chlor... 27 7.8
U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chlor... 27 7.8
L00665-1|AAA28148.1| 537|Caenorhabditis elegans protein ( Caeno... 27 7.8
AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo... 27 7.8
AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride ... 27 7.8
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 117 bits (282), Expect = 6e-27
Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Frame = +2
Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433
REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I
Sbjct: 62 REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121
Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580
SD LT KYGK + E K+ ++ +PPK+LVE +EI
Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = +3
Query: 81 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254
S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHII
Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 117 bits (282), Expect = 6e-27
Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Frame = +2
Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433
REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I
Sbjct: 62 REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121
Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580
SD LT KYGK + E K+ ++ +PPK+LVE +EI
Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = +3
Query: 81 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254
S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHII
Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 117 bits (282), Expect = 6e-27
Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Frame = +2
Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433
REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I
Sbjct: 62 REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121
Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580
SD LT KYGK + E K+ ++ +PPK+LVE +EI
Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = +3
Query: 81 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254
S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHII
Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 117 bits (282), Expect = 6e-27
Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Frame = +2
Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433
REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I
Sbjct: 62 REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121
Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580
SD LT KYGK + E K+ ++ +PPK+LVE +EI
Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = +3
Query: 81 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254
S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHII
Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61
>U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug
resistance related protein2 protein.
Length = 1525
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 17 FFWFVGITKIIAKKLFKNKDVFDKSKLHQTQN 112
F WF G+ + KK +N+D++D +++ + +N
Sbjct: 220 FQWFTGLAYLGNKKSLENEDLWDLNEIDKAEN 251
>U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine
receptor, class x protein47 protein.
Length = 301
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 517 QFVLIVFTFSPLHASAYTFSIFCSEQVRYY 428
QF L F F +H T SIFC+ R Y
Sbjct: 246 QFFLTTFAFLTIHTCDGTISIFCNGDFRKY 275
>U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug
resistance protein familyprotein 2 protein.
Length = 1525
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 17 FFWFVGITKIIAKKLFKNKDVFDKSKLHQTQN 112
F WF G+ + KK +N+D++D +++ + +N
Sbjct: 220 FQWFTGLAYLGNKKSLENEDLWDLNEIDKAEN 251
>Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical
protein C18E9.2a protein.
Length = 364
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 26 FVGITKIIAKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193
F K++AKK +NKD + S T++P K +K EEE AE E++
Sbjct: 90 FFRAKKLVAKKK-ENKDKGNDSSAEVTKSPKGVVEKRNKKAKEEETATEAEGDEKE 144
>Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 752
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 47 IAKKLFKNKDVFDKSKLHQTQNPFET-SYKPSKIIGEEENG 166
++ ++ N DVF T+NP+ T +KP KI ++G
Sbjct: 498 VSANVYTNDDVFLYGHATSTKNPYSTLQFKPLKIKNLHDDG 538
>U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform a protein.
Length = 1050
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 50 AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193
AKK + + K NP++ S + K+ EE+ + ++TE D
Sbjct: 846 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 893
>U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform b protein.
Length = 1085
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 50 AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193
AKK + + K NP++ S + K+ EE+ + ++TE D
Sbjct: 849 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 896
>L00665-1|AAA28148.1| 537|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc4, complete
cds. ).
Length = 537
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 35 ITKIIAKKLFKNKDVFDKSKLHQTQNPFE--TSYKPSKIIGEEENGISAEI 181
+TK + +K NKD K+ +N ++Y PS + ++ GI E+
Sbjct: 219 VTKFVTRKCLINKDAIKKNADDFVKNARTEISNYHPSMVFNCDQTGIQKEL 269
>AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type
chloride channel CLH-4b protein.
Length = 1084
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 50 AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193
AKK + + K NP++ S + K+ EE+ + ++TE D
Sbjct: 848 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 895
>AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 978
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 50 AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193
AKK + + K NP++ S + K+ EE+ + ++TE D
Sbjct: 774 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 821
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,455,005
Number of Sequences: 27780
Number of extensions: 267945
Number of successful extensions: 797
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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