BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0833 (603 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 117 6e-27 Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 117 6e-27 Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 117 6e-27 Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 117 6e-27 U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis... 29 2.6 U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine rece... 29 2.6 U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis... 29 2.6 Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 29 3.4 Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 27 7.8 U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chlor... 27 7.8 U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chlor... 27 7.8 L00665-1|AAA28148.1| 537|Caenorhabditis elegans protein ( Caeno... 27 7.8 AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo... 27 7.8 AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride ... 27 7.8 >Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical protein K10C8.3c protein. Length = 432 Score = 117 bits (282), Expect = 6e-27 Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%) Frame = +2 Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433 REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I Sbjct: 62 REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121 Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580 SD LT KYGK + E K+ ++ +PPK+LVE +EI Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173 Score = 60.5 bits (140), Expect = 9e-10 Identities = 31/58 (53%), Positives = 37/58 (63%) Frame = +3 Query: 81 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254 S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHII Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61 >Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical protein K10C8.3a protein. Length = 445 Score = 117 bits (282), Expect = 6e-27 Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%) Frame = +2 Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433 REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I Sbjct: 62 REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121 Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580 SD LT KYGK + E K+ ++ +PPK+LVE +EI Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173 Score = 60.5 bits (140), Expect = 9e-10 Identities = 31/58 (53%), Positives = 37/58 (63%) Frame = +3 Query: 81 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254 S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHII Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61 >Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical protein K10C8.3c protein. Length = 432 Score = 117 bits (282), Expect = 6e-27 Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%) Frame = +2 Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433 REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I Sbjct: 62 REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121 Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580 SD LT KYGK + E K+ ++ +PPK+LVE +EI Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173 Score = 60.5 bits (140), Expect = 9e-10 Identities = 31/58 (53%), Positives = 37/58 (63%) Frame = +3 Query: 81 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254 S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHII Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61 >Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical protein K10C8.3a protein. Length = 445 Score = 117 bits (282), Expect = 6e-27 Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%) Frame = +2 Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433 REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I Sbjct: 62 REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121 Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580 SD LT KYGK + E K+ ++ +PPK+LVE +EI Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173 Score = 60.5 bits (140), Expect = 9e-10 Identities = 31/58 (53%), Positives = 37/58 (63%) Frame = +3 Query: 81 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254 S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHII Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61 >U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resistance related protein2 protein. Length = 1525 Score = 29.1 bits (62), Expect = 2.6 Identities = 10/32 (31%), Positives = 21/32 (65%) Frame = +2 Query: 17 FFWFVGITKIIAKKLFKNKDVFDKSKLHQTQN 112 F WF G+ + KK +N+D++D +++ + +N Sbjct: 220 FQWFTGLAYLGNKKSLENEDLWDLNEIDKAEN 251 >U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine receptor, class x protein47 protein. Length = 301 Score = 29.1 bits (62), Expect = 2.6 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -3 Query: 517 QFVLIVFTFSPLHASAYTFSIFCSEQVRYY 428 QF L F F +H T SIFC+ R Y Sbjct: 246 QFFLTTFAFLTIHTCDGTISIFCNGDFRKY 275 >U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resistance protein familyprotein 2 protein. Length = 1525 Score = 29.1 bits (62), Expect = 2.6 Identities = 10/32 (31%), Positives = 21/32 (65%) Frame = +2 Query: 17 FFWFVGITKIIAKKLFKNKDVFDKSKLHQTQN 112 F WF G+ + KK +N+D++D +++ + +N Sbjct: 220 FQWFTGLAYLGNKKSLENEDLWDLNEIDKAEN 251 >Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical protein C18E9.2a protein. Length = 364 Score = 28.7 bits (61), Expect = 3.4 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = +2 Query: 26 FVGITKIIAKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193 F K++AKK +NKD + S T++P K +K EEE AE E++ Sbjct: 90 FFRAKKLVAKKK-ENKDKGNDSSAEVTKSPKGVVEKRNKKAKEEETATEAEGDEKE 144 >Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical protein D1081.3 protein. Length = 752 Score = 27.5 bits (58), Expect = 7.8 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +2 Query: 47 IAKKLFKNKDVFDKSKLHQTQNPFET-SYKPSKIIGEEENG 166 ++ ++ N DVF T+NP+ T +KP KI ++G Sbjct: 498 VSANVYTNDDVFLYGHATSTKNPYSTLQFKPLKIKNLHDDG 538 >U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chloride channel protein4, isoform a protein. Length = 1050 Score = 27.5 bits (58), Expect = 7.8 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +2 Query: 50 AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193 AKK + + K NP++ S + K+ EE+ + ++TE D Sbjct: 846 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 893 >U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chloride channel protein4, isoform b protein. Length = 1085 Score = 27.5 bits (58), Expect = 7.8 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +2 Query: 50 AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193 AKK + + K NP++ S + K+ EE+ + ++TE D Sbjct: 849 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 896 >L00665-1|AAA28148.1| 537|Caenorhabditis elegans protein ( Caenorhabditis eleganstransposable element Tc4, complete cds. ). Length = 537 Score = 27.5 bits (58), Expect = 7.8 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +2 Query: 35 ITKIIAKKLFKNKDVFDKSKLHQTQNPFE--TSYKPSKIIGEEENGISAEI 181 +TK + +K NKD K+ +N ++Y PS + ++ GI E+ Sbjct: 219 VTKFVTRKCLINKDAIKKNADDFVKNARTEISNYHPSMVFNCDQTGIQKEL 269 >AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chloride channel CLH-4b protein. Length = 1084 Score = 27.5 bits (58), Expect = 7.8 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +2 Query: 50 AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193 AKK + + K NP++ S + K+ EE+ + ++TE D Sbjct: 848 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 895 >AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride channel protein protein. Length = 978 Score = 27.5 bits (58), Expect = 7.8 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +2 Query: 50 AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193 AKK + + K NP++ S + K+ EE+ + ++TE D Sbjct: 774 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 821 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,455,005 Number of Sequences: 27780 Number of extensions: 267945 Number of successful extensions: 797 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 793 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1289949676 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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