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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0833
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75547-17|CAN99726.1|  432|Caenorhabditis elegans Hypothetical p...   117   6e-27
Z75547-16|CAA99907.2|  445|Caenorhabditis elegans Hypothetical p...   117   6e-27
Z74474-5|CAN99697.1|  432|Caenorhabditis elegans Hypothetical pr...   117   6e-27
Z74474-4|CAA98956.2|  445|Caenorhabditis elegans Hypothetical pr...   117   6e-27
U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis...    29   2.6  
U41995-1|AAA83459.1|  301|Caenorhabditis elegans Serpentine rece...    29   2.6  
U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis...    29   2.6  
Z70034-11|CAA93853.2|  364|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical pr...    27   7.8  
U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type  chlor...    27   7.8  
U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type  chlor...    27   7.8  
L00665-1|AAA28148.1|  537|Caenorhabditis elegans protein ( Caeno...    27   7.8  
AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo...    27   7.8  
AF173173-1|AAF13166.1|  978|Caenorhabditis elegans CLC chloride ...    27   7.8  

>Z75547-17|CAN99726.1|  432|Caenorhabditis elegans Hypothetical
           protein K10C8.3c protein.
          Length = 432

 Score =  117 bits (282), Expect = 6e-27
 Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
 Frame = +2

Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433
           REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I
Sbjct: 62  REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121

Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580
           SD LT KYGK         + E       K+  ++   +PPK+LVE   +EI
Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173



 Score = 60.5 bits (140), Expect = 9e-10
 Identities = 31/58 (53%), Positives = 37/58 (63%)
 Frame = +3

Query: 81  STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254
           S    Y KLKT+LRL INR           A K+R EIA+YIA+ K +RA+IRVEHII
Sbjct: 4   SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61


>Z75547-16|CAA99907.2|  445|Caenorhabditis elegans Hypothetical
           protein K10C8.3a protein.
          Length = 445

 Score =  117 bits (282), Expect = 6e-27
 Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
 Frame = +2

Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433
           REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I
Sbjct: 62  REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121

Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580
           SD LT KYGK         + E       K+  ++   +PPK+LVE   +EI
Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173



 Score = 60.5 bits (140), Expect = 9e-10
 Identities = 31/58 (53%), Positives = 37/58 (63%)
 Frame = +3

Query: 81  STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254
           S    Y KLKT+LRL INR           A K+R EIA+YIA+ K +RA+IRVEHII
Sbjct: 4   SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61


>Z74474-5|CAN99697.1|  432|Caenorhabditis elegans Hypothetical
           protein K10C8.3c protein.
          Length = 432

 Score =  117 bits (282), Expect = 6e-27
 Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
 Frame = +2

Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433
           REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I
Sbjct: 62  REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121

Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580
           SD LT KYGK         + E       K+  ++   +PPK+LVE   +EI
Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173



 Score = 60.5 bits (140), Expect = 9e-10
 Identities = 31/58 (53%), Positives = 37/58 (63%)
 Frame = +3

Query: 81  STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254
           S    Y KLKT+LRL INR           A K+R EIA+YIA+ K +RA+IRVEHII
Sbjct: 4   SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61


>Z74474-4|CAA98956.2|  445|Caenorhabditis elegans Hypothetical
           protein K10C8.3a protein.
          Length = 445

 Score =  117 bits (282), Expect = 6e-27
 Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
 Frame = +2

Query: 254 REDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKII 433
           REDY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K I
Sbjct: 62  REDYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTI 121

Query: 434 SDLLTAKYGKGVC*CM*RRECE---HNKDKLKHQMSVHSPPKILVENISLEI 580
           SD LT KYGK         + E       K+  ++   +PPK+LVE   +EI
Sbjct: 122 SDQLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEI 173



 Score = 60.5 bits (140), Expect = 9e-10
 Identities = 31/58 (53%), Positives = 37/58 (63%)
 Frame = +3

Query: 81  STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHII 254
           S    Y KLKT+LRL INR           A K+R EIA+YIA+ K +RA+IRVEHII
Sbjct: 4   SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHII 61


>U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug
           resistance related protein2 protein.
          Length = 1525

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +2

Query: 17  FFWFVGITKIIAKKLFKNKDVFDKSKLHQTQN 112
           F WF G+  +  KK  +N+D++D +++ + +N
Sbjct: 220 FQWFTGLAYLGNKKSLENEDLWDLNEIDKAEN 251


>U41995-1|AAA83459.1|  301|Caenorhabditis elegans Serpentine
           receptor, class x protein47 protein.
          Length = 301

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 517 QFVLIVFTFSPLHASAYTFSIFCSEQVRYY 428
           QF L  F F  +H    T SIFC+   R Y
Sbjct: 246 QFFLTTFAFLTIHTCDGTISIFCNGDFRKY 275


>U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug
           resistance protein familyprotein 2 protein.
          Length = 1525

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +2

Query: 17  FFWFVGITKIIAKKLFKNKDVFDKSKLHQTQN 112
           F WF G+  +  KK  +N+D++D +++ + +N
Sbjct: 220 FQWFTGLAYLGNKKSLENEDLWDLNEIDKAEN 251


>Z70034-11|CAA93853.2|  364|Caenorhabditis elegans Hypothetical
           protein C18E9.2a protein.
          Length = 364

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 26  FVGITKIIAKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193
           F    K++AKK  +NKD  + S    T++P     K +K   EEE    AE  E++
Sbjct: 90  FFRAKKLVAKKK-ENKDKGNDSSAEVTKSPKGVVEKRNKKAKEEETATEAEGDEKE 144


>Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical
           protein D1081.3 protein.
          Length = 752

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 47  IAKKLFKNKDVFDKSKLHQTQNPFET-SYKPSKIIGEEENG 166
           ++  ++ N DVF       T+NP+ T  +KP KI    ++G
Sbjct: 498 VSANVYTNDDVFLYGHATSTKNPYSTLQFKPLKIKNLHDDG 538


>U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type  chloride
           channel protein4, isoform a protein.
          Length = 1050

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 50  AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193
           AKK   +    +  K     NP++ S +  K+  EE+  +  ++TE D
Sbjct: 846 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 893


>U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type  chloride
           channel protein4, isoform b protein.
          Length = 1085

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 50  AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193
           AKK   +    +  K     NP++ S +  K+  EE+  +  ++TE D
Sbjct: 849 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 896


>L00665-1|AAA28148.1|  537|Caenorhabditis elegans protein (
           Caenorhabditis eleganstransposable element Tc4, complete
           cds. ).
          Length = 537

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 35  ITKIIAKKLFKNKDVFDKSKLHQTQNPFE--TSYKPSKIIGEEENGISAEI 181
           +TK + +K   NKD   K+     +N     ++Y PS +   ++ GI  E+
Sbjct: 219 VTKFVTRKCLINKDAIKKNADDFVKNARTEISNYHPSMVFNCDQTGIQKEL 269


>AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type
           chloride channel CLH-4b protein.
          Length = 1084

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 50  AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193
           AKK   +    +  K     NP++ S +  K+  EE+  +  ++TE D
Sbjct: 848 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 895


>AF173173-1|AAF13166.1|  978|Caenorhabditis elegans CLC chloride
           channel protein protein.
          Length = 978

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 50  AKKLFKNKDVFDKSKLHQTQNPFETSYKPSKIIGEEENGISAEITERD 193
           AKK   +    +  K     NP++ S +  K+  EE+  +  ++TE D
Sbjct: 774 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 821


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,455,005
Number of Sequences: 27780
Number of extensions: 267945
Number of successful extensions: 797
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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