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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0832
         (508 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch...    28   0.92 
SPAC25B8.11 |||transcription factor|Schizosaccharomyces pombe|ch...    28   0.92 
SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit Sf...    27   1.2  
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce...    27   2.1  
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2...    26   3.7  
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac...    25   4.9  
SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces pombe...    25   4.9  
SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces pombe...    25   4.9  
SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces pombe...    25   4.9  
SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces pombe...    25   4.9  
SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyce...    25   4.9  
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce...    25   6.5  
SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces...    25   6.5  
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb...    25   8.6  
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch...    25   8.6  
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||...    25   8.6  
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub...    25   8.6  
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy...    25   8.6  
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    25   8.6  
SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1 |...    25   8.6  

>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
           Eme1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 738

 Score = 27.9 bits (59), Expect = 0.92
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = +3

Query: 33  SSSKIY*FTMACSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVA 212
           S SK+    +A S  +  ++ D P+ +T   S L+ F+T  +    +  + VLPS  D  
Sbjct: 26  SPSKVCRDNIALSEHNVITVLDTPQRSTQCDSLLKSFSTPLV----SGSEDVLPSPRDAL 81

Query: 213 TEKTQKSLFDGI 248
               +KS+ D +
Sbjct: 82  NITNKKSVTDNL 93


>SPAC25B8.11 |||transcription factor|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 654

 Score = 27.9 bits (59), Expect = 0.92
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 299 PLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTETXEKNPLL 421
           P  D D I+  +E   F NG+ +FD   +K+  T  K+P++
Sbjct: 159 PTCDSD-IDLIREYFSFENGVCSFDNMTVKYVSTSSKSPVM 198


>SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit
           Sfc3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1339

 Score = 27.5 bits (58), Expect = 1.2
 Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +2

Query: 236 IRRYREVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFL----NGIENFDPTXLKHTETX 403
           + R + + +   +H E+ E  P+  ++  + EKEK+  +      +E+  P    H  T 
Sbjct: 789 LSRRKSMPAEIKRHKESSETKPVDKEEVKKNEKEKDDPMRLAQQLLESLAPDFALHENTQ 848

Query: 404 EKNPL 418
           +K+P+
Sbjct: 849 QKSPV 853


>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 674

 Score = 26.6 bits (56), Expect = 2.1
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -1

Query: 217 SVATSSADGSTIFSLVSTSRRQLVLKPSS*LFRSVATLGRSFRE 86
           SV   + DG  +  +  +++RQ V+ P +  F +   +GR F+E
Sbjct: 86  SVVAFTKDGERLVGV--SAKRQAVINPENTFFATKRLIGRRFKE 127


>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 426

 Score = 25.8 bits (54), Expect = 3.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 224 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQ 120
           G ++G  +S    +LFIGVD     G+  F   LQ
Sbjct: 385 GEIAGTAYSSSGDSLFIGVDDPMLGGILEFRRPLQ 419


>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
           complex subunit, Fip1 homolog |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 344

 Score = 25.4 bits (53), Expect = 4.9
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 251 EVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFD 373
           EV +++ +   T E  P  D DA+     KN F   +E+FD
Sbjct: 87  EVKTTEPQDLSTAETAPKVDIDAVPTIDGKNIFEIDLESFD 127


>SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 25.4 bits (53), Expect = 4.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 226 WVFSVATSSADGSTIFSLVSTSRRQL 149
           W+FSVA S      IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147


>SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 25.4 bits (53), Expect = 4.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 226 WVFSVATSSADGSTIFSLVSTSRRQL 149
           W+FSVA S      IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147


>SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 25.4 bits (53), Expect = 4.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 226 WVFSVATSSADGSTIFSLVSTSRRQL 149
           W+FSVA S      IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147


>SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 25.4 bits (53), Expect = 4.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 226 WVFSVATSSADGSTIFSLVSTSRRQL 149
           W+FSVA S      IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147


>SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 497

 Score = 25.4 bits (53), Expect = 4.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 229 FWVFSVATSSADGSTIFSLVSTSRRQLVLKPSS 131
           FW +S+  S   G  I SL +   RQ + +PSS
Sbjct: 83  FWGYSLTFSHEGGPYIGSLANFGLRQTLGRPSS 115


>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 855

 Score = 25.0 bits (52), Expect = 6.5
 Identities = 17/73 (23%), Positives = 37/73 (50%)
 Frame = +3

Query: 6   AECTNLLSPSSSKIY*FTMACSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 185
           A+   L   +SS +Y +++    +   ++ +  K A  ++       TS   D  +N K 
Sbjct: 727 ADMMMLQEGASSMVY-YSLTNLDNPGATVNEAAKTAATIEQNEHEIQTSV--DPISNVKA 783

Query: 186 VLPSAEDVATEKT 224
           +LP+A+DV+++ +
Sbjct: 784 ILPNADDVSSKNS 796


>SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 398

 Score = 25.0 bits (52), Expect = 6.5
 Identities = 19/57 (33%), Positives = 33/57 (57%)
 Frame = +3

Query: 84  PSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEK 254
           P  K L K+  +L+S L+    SCL+D  T+ K ++       +EKTQ+ +FD +++
Sbjct: 14  PGNKCLAKL-NELESILKDAKKSCLKDPTTSMKELV-----ACSEKTQQ-VFDDLKR 63


>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 323

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 218 EDPEVFIRRY-REVDSSQLKHTETQEK 295
           ED ++FI+RY R VDS+ L+  E + +
Sbjct: 21  EDLKIFIKRYERSVDSTLLEIDENKRE 47


>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1822

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 218 EDPEVFIRRYREVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFD 373
           + PE   ++Y+E D    K +      P+PD  A  A  EK K  +G+ N +
Sbjct: 89  KSPEGIEQKYQEEDLKDDKKSNETIATPVPDA-ASRASLEKQK--SGLTNLE 137


>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 247

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 218 EDPEVFIRRY-REVDSSQLKHTETQEK 295
           ED ++FI+RY R VDS+ L+  E + +
Sbjct: 21  EDLKIFIKRYERSVDSTLLEIDENKRE 47


>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
           subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 838

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 332 KEKNKFLNGIENFDPTXLKHTETXEKNPLLTKXV 433
           +E   F+  I+NF    L+H ET     LL K +
Sbjct: 150 EETVAFIQSIDNFVEKILRHAETSAIMDLLLKFI 183


>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +2

Query: 227 EVFIRRYREVDSS--QLKHTETQEKNPLPDKDAIEAEKEKN 343
           EV    ++E  SS   ++     E+N  P+ + +E EKE+N
Sbjct: 404 EVEANNHQEKPSSLPAVEQINVNEENNTPETEGLEDEKEEN 444


>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
 Frame = +3

Query: 45  IY*FTMACSVSDTPS---LKDLPKVATDLK 125
           +Y F+  CS SDT S   LK  P++ TD++
Sbjct: 75  VYDFSNLCSDSDTFSGSELKKCPQIETDIQ 104


>SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 550

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 154 VSVTSTPMKRLCFRLLKTSPLR 219
           V +T +P +  CFRL +  PLR
Sbjct: 134 VDITLSPGEEKCFRLKRRIPLR 155


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,762,976
Number of Sequences: 5004
Number of extensions: 33546
Number of successful extensions: 144
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 202220600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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