Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0832
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 60 1e-09
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 36 0.019
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 30 0.95
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 1.3
SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 29 1.7
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 29 2.2
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) 29 2.9
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 28 3.8
SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01) 27 6.7
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) 27 8.9
SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_37689| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 27 8.9
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/57 (50%), Positives = 36/57 (63%)
Frame = +2
Query: 248 REVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTETXEKNPL 418
+ + S+L+H ET+EKN LP KD I EK F +G+E F LKH ET EKNPL
Sbjct: 455 KSFEKSKLQHVETKEKNTLPTKDTIADEKRTAPF-SGVEVFQKNKLKHVETLEKNPL 510
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 224 PEVF--IRRYREVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTE 397
PEV + D+S+LKH E QEKNPLP KD I E + + ++ FD + LKH +
Sbjct: 674 PEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDITTESTETR--AEVKTFDHSKLKHVQ 731
Query: 398 TXEKNPL 418
T EKNPL
Sbjct: 732 TEEKNPL 738
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +2
Query: 248 REVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKF--LNGIENFDPTXLKHTETXEKNPLL 421
+ D S+LKH ET EKNPLP ++ E ++ + +FD + LKH E EKNPL
Sbjct: 644 KSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLP 703
Query: 422 TK 427
TK
Sbjct: 704 TK 705
Score = 55.2 bits (127), Expect = 3e-08
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +2
Query: 224 PEVFIRRYR--EVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTE 397
PEV R + D+S+LKH ET+EK +P KD IEAE ++ +++FD + LKH
Sbjct: 522 PEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSR--AEVKSFDHSKLKHVV 579
Query: 398 TXEKNPLLT 424
T EKNPL T
Sbjct: 580 TQEKNPLPT 588
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = +2
Query: 257 DSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLN--GIENFDPTXLKHTETXEKNPLLTKX 430
D++ LKH +T+EKN LP + I+ E + ++F + +++F+ + L+H ET EKN L TK
Sbjct: 418 DAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKD 477
Query: 431 VI 436
I
Sbjct: 478 TI 479
Score = 50.8 bits (116), Expect = 6e-07
Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 263 SQLKHTETQEKNPLPDKDAIEAE--KEKNKFLNGIENFDPTXLKHTETXEKNPLLTKXVI 436
++LKH ET EKNPLPD I AE E + + FD + LKH ET EK + TK VI
Sbjct: 497 NKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVI 556
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = +2
Query: 257 DSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTETXEKNPLLTKXVI 436
D ++LKH TQEK+ +P ++ I+ E ++ +++FD + LKH ET EKNPL + V+
Sbjct: 611 DHTKLKHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVL 668
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +2
Query: 248 REVDSSQLKHTETQEKNPLPDKDAIEAEK-EKNK-FLNGIENFDPTXLKHTETXEKN 412
+ D S+LKH TQEKNPLP + E KNK + + +FD T LKH T EK+
Sbjct: 568 KSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKS 624
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 257 DSSQLKHTETQEKNPLPDKDAIEAEK 334
D S+LKH +T+EKNPLPD I EK
Sbjct: 723 DHSKLKHVQTEEKNPLPDAKTIAQEK 748
Score = 33.9 bits (74), Expect = 0.077
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +3
Query: 99 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218
+P+V D +S++ F+TS L+ V+T EK+V+P+ + + E
Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 99 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218
+PK D +S++ F+ + L+ V T EK ++PS ED+ E
Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 35.9 bits (79), Expect = 0.019
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 87 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQKSLFD 242
SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K + S F+
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFE 385
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 30.3 bits (65), Expect = 0.95
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -3
Query: 224 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGS 81
GLL+GD+F R K N+ I VD T G + FEL + + E+ GS
Sbjct: 74 GLLAGDIFRRPKANILISVDGV-TKG-DKFELPAKASFPVQEMAGLGS 119
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 69 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 215
S SD P+ D A+D+KS + T DV T++ V PSA DV T
Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666
>SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -3
Query: 224 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 129
GLL+GD+F R K N+ I VD T G + FEL
Sbjct: 51 GLLAGDIFRRPKANILISVDGV-TKG-DKFEL 80
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 17 ESSIPFLIKNILIHNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 151
E S+PF N N ++ +P R PQG H + A+ +QH+
Sbjct: 224 EMSLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 218 EDPEVFIRRYREVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHT- 394
E VF +R R + + + TET+E NP D +AE+ + G + T K T
Sbjct: 274 EGKSVF-KRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTN 332
Query: 395 -ETXEKNPL 418
ET K L
Sbjct: 333 METLRKEML 341
>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
Length = 492
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 219 SQWRRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLWRPW 103
S WRRLQ+ A S + + D +L A+ G W PW
Sbjct: 419 SLWRRLQELNATSLEYRLQPEDPRSIAL-AERLGRWEPW 456
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 90 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218
L DL +V +LKS+ EG CL D++ + DV E
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKE 1166
>SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 264 LESTSRYRRIKTSGSSQWRRLQQTEAQSFHWCRRHGD 154
L TS Y ++ SGSS RRL+ S+ R GD
Sbjct: 38 LSKTSSYGDVELSGSSSRRRLRVMAMSSYRGVRVIGD 74
>SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01)
Length = 590
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 259 FEPAEAHRDSGEEPASGQRCYRSGEG 336
FEP E H DSG+E Y EG
Sbjct: 266 FEPMEIHDDSGDEDVDSDDDYDDREG 291
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 27.1 bits (57), Expect = 8.9
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +1
Query: 157 SVTSTPMKRLCFRLLKTSPLRRPRSLY-----STVSRS*FEPAEAHRDSGEEPASGQRCY 321
SVT T +RL R S L PRS+ T+ R A R GEE G+ Y
Sbjct: 438 SVTGTFARRLVSRTTDASSLEDPRSVVVTSSPRTLGRISNGTTSARRVEGEEHVCGE--Y 495
Query: 322 RSGEGKEQIP 351
+ KE +P
Sbjct: 496 KCSLCKEVVP 505
>SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)
Length = 781
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 34 PHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 174
P + + + P P + L P T+ P+ V +ASTP S +P
Sbjct: 517 PRNSFAEYEKPLPTLPLSPTNTTTGRPRLSTVPPEASTPTDSFPKSP 563
>SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 332 SPLR*HLCPEAGSSPESRCASAGSNQLLDTVE 237
SPL C SSP+S+C + S+ + D E
Sbjct: 62 SPLSPESCSIVHSSPDSQCTTPNSSMITDDCE 93
>SB_37689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -3
Query: 191 KHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGSVTHGAGHCE 54
+H + + D+T + V EL V G QGG V H G CE
Sbjct: 128 RHIMKMNFDLTPGSSVPHTELNRVVKGWYELYGQGGIVAHKGGDCE 173
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 119 VCGDLGEVFQGGSVTHGAGHCESIYF 42
VC D G + G+V++G HC + Y+
Sbjct: 271 VCEDNGRWYLHGAVSYGKLHCPTTYY 296
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = -1
Query: 178 SLVSTSRRQLVLKPSS*LFRSVATLGRSFREGVSLTEQAIVNQYIFDEEGDRRFVH 11
SLV TS KP L+ VA +GR F V+ T+ + + EEG + H
Sbjct: 12 SLVGTSCSNSQEKPIQRLYNVVAVVGRHFTYRVTPTDGS--KNFKITEEGKKTLPH 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,224,260
Number of Sequences: 59808
Number of extensions: 262865
Number of successful extensions: 983
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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