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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0832
         (508 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)                    60   1e-09
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)               36   0.019
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)               30   0.95 
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)               30   1.3  
SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)                29   1.7  
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)            29   2.2  
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)              29   2.9  
SB_52732| Best HMM Match : M (HMM E-Value=0.019)                       28   3.8  
SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.7  
SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01)                   27   6.7  
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  
SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)             27   8.9  
SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  
SB_37689| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)                     27   8.9  
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  

>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
          Length = 750

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = +2

Query: 248 REVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTETXEKNPL 418
           +  + S+L+H ET+EKN LP KD I  EK    F +G+E F    LKH ET EKNPL
Sbjct: 455 KSFEKSKLQHVETKEKNTLPTKDTIADEKRTAPF-SGVEVFQKNKLKHVETLEKNPL 510



 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = +2

Query: 224 PEVF--IRRYREVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTE 397
           PEV   +      D+S+LKH E QEKNPLP KD I  E  + +    ++ FD + LKH +
Sbjct: 674 PEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDITTESTETR--AEVKTFDHSKLKHVQ 731

Query: 398 TXEKNPL 418
           T EKNPL
Sbjct: 732 TEEKNPL 738



 Score = 55.6 bits (128), Expect = 2e-08
 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
 Frame = +2

Query: 248 REVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKF--LNGIENFDPTXLKHTETXEKNPLL 421
           +  D S+LKH ET EKNPLP    ++ E        ++ + +FD + LKH E  EKNPL 
Sbjct: 644 KSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLP 703

Query: 422 TK 427
           TK
Sbjct: 704 TK 705



 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = +2

Query: 224 PEVFIRRYR--EVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTE 397
           PEV   R    + D+S+LKH ET+EK  +P KD IEAE   ++    +++FD + LKH  
Sbjct: 522 PEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSR--AEVKSFDHSKLKHVV 579

Query: 398 TXEKNPLLT 424
           T EKNPL T
Sbjct: 580 TQEKNPLPT 588



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = +2

Query: 257 DSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLN--GIENFDPTXLKHTETXEKNPLLTKX 430
           D++ LKH +T+EKN LP  + I+ E + ++F +   +++F+ + L+H ET EKN L TK 
Sbjct: 418 DAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKD 477

Query: 431 VI 436
            I
Sbjct: 478 TI 479



 Score = 50.8 bits (116), Expect = 6e-07
 Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
 Frame = +2

Query: 263 SQLKHTETQEKNPLPDKDAIEAE--KEKNKFLNGIENFDPTXLKHTETXEKNPLLTKXVI 436
           ++LKH ET EKNPLPD   I AE   E     + +  FD + LKH ET EK  + TK VI
Sbjct: 497 NKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVI 556



 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 24/60 (40%), Positives = 39/60 (65%)
 Frame = +2

Query: 257 DSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTETXEKNPLLTKXVI 436
           D ++LKH  TQEK+ +P ++ I+ E   ++    +++FD + LKH ET EKNPL +  V+
Sbjct: 611 DHTKLKHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVL 668



 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
 Frame = +2

Query: 248 REVDSSQLKHTETQEKNPLPDKDAIEAEK-EKNK-FLNGIENFDPTXLKHTETXEKN 412
           +  D S+LKH  TQEKNPLP    +  E   KNK   + + +FD T LKH  T EK+
Sbjct: 568 KSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKS 624



 Score = 38.7 bits (86), Expect = 0.003
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +2

Query: 257 DSSQLKHTETQEKNPLPDKDAIEAEK 334
           D S+LKH +T+EKNPLPD   I  EK
Sbjct: 723 DHSKLKHVQTEEKNPLPDAKTIAQEK 748



 Score = 33.9 bits (74), Expect = 0.077
 Identities = 15/40 (37%), Positives = 28/40 (70%)
 Frame = +3

Query: 99  LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218
           +P+V  D +S++  F+TS L+ V+T EK+V+P+ + +  E
Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559



 Score = 31.5 bits (68), Expect = 0.41
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +3

Query: 99  LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218
           +PK   D +S++  F+ + L+ V T EK ++PS ED+  E
Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635


>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
          Length = 413

 Score = 35.9 bits (79), Expect = 0.019
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +3

Query: 87  SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQKSLFD 242
           SLK L K+ TDL+S ++G  ++ L ++V+   K+V    +  +T K + S F+
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFE 385


>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
          Length = 385

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 20/48 (41%), Positives = 27/48 (56%)
 Frame = -3

Query: 224 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGS 81
           GLL+GD+F R K N+ I VD   T G + FEL  +    + E+   GS
Sbjct: 74  GLLAGDIFRRPKANILISVDGV-TKG-DKFELPAKASFPVQEMAGLGS 119


>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
          Length = 1249

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 69  SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 215
           S SD P+  D    A+D+KS  +   T    DV  T++  V PSA DV T
Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666


>SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 90

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = -3

Query: 224 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 129
           GLL+GD+F R K N+ I VD   T G + FEL
Sbjct: 51  GLLAGDIFRRPKANILISVDGV-TKG-DKFEL 80


>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
          Length = 1064

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 17  ESSIPFLIKNILIHNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 151
           E S+PF   N    N  ++    +P R PQG H   + A+ +QH+
Sbjct: 224 EMSLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265


>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
          Length = 446

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = +2

Query: 218 EDPEVFIRRYREVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHT- 394
           E   VF +R R  + + +  TET+E NP    D  +AE+ +     G  +   T  K T 
Sbjct: 274 EGKSVF-KRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTN 332

Query: 395 -ETXEKNPL 418
            ET  K  L
Sbjct: 333 METLRKEML 341


>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
          Length = 492

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -2

Query: 219 SQWRRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLWRPW 103
           S WRRLQ+  A S  +  +  D    +L A+  G W PW
Sbjct: 419 SLWRRLQELNATSLEYRLQPEDPRSIAL-AERLGRWEPW 456


>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
          Length = 1366

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 90   LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218
            L DL +V  +LKS+ EG    CL D++     +     DV  E
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKE 1166


>SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1052

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 264 LESTSRYRRIKTSGSSQWRRLQQTEAQSFHWCRRHGD 154
           L  TS Y  ++ SGSS  RRL+     S+   R  GD
Sbjct: 38  LSKTSSYGDVELSGSSSRRRLRVMAMSSYRGVRVIGD 74


>SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01)
          Length = 590

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 259 FEPAEAHRDSGEEPASGQRCYRSGEG 336
           FEP E H DSG+E       Y   EG
Sbjct: 266 FEPMEIHDDSGDEDVDSDDDYDDREG 291


>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 598

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
 Frame = +1

Query: 157 SVTSTPMKRLCFRLLKTSPLRRPRSLY-----STVSRS*FEPAEAHRDSGEEPASGQRCY 321
           SVT T  +RL  R    S L  PRS+       T+ R       A R  GEE   G+  Y
Sbjct: 438 SVTGTFARRLVSRTTDASSLEDPRSVVVTSSPRTLGRISNGTTSARRVEGEEHVCGE--Y 495

Query: 322 RSGEGKEQIP 351
           +    KE +P
Sbjct: 496 KCSLCKEVVP 505


>SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)
          Length = 781

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 34  PHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 174
           P   + + + P P + L P  T+   P+   V  +ASTP  S   +P
Sbjct: 517 PRNSFAEYEKPLPTLPLSPTNTTTGRPRLSTVPPEASTPTDSFPKSP 563


>SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 959

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 332 SPLR*HLCPEAGSSPESRCASAGSNQLLDTVE 237
           SPL    C    SSP+S+C +  S+ + D  E
Sbjct: 62  SPLSPESCSIVHSSPDSQCTTPNSSMITDDCE 93


>SB_37689| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 330

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 191 KHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGSVTHGAGHCE 54
           +H + +  D+T  + V   EL   V G      QGG V H  G CE
Sbjct: 128 RHIMKMNFDLTPGSSVPHTELNRVVKGWYELYGQGGIVAHKGGDCE 173


>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 696

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 119 VCGDLGEVFQGGSVTHGAGHCESIYF 42
           VC D G  +  G+V++G  HC + Y+
Sbjct: 271 VCEDNGRWYLHGAVSYGKLHCPTTYY 296


>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1884

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -1

Query: 178 SLVSTSRRQLVLKPSS*LFRSVATLGRSFREGVSLTEQAIVNQYIFDEEGDRRFVH 11
           SLV TS      KP   L+  VA +GR F   V+ T+ +    +   EEG +   H
Sbjct: 12  SLVGTSCSNSQEKPIQRLYNVVAVVGRHFTYRVTPTDGS--KNFKITEEGKKTLPH 65


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,224,260
Number of Sequences: 59808
Number of extensions: 262865
Number of successful extensions: 983
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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