BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0832 (508 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 60 1e-09 SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 36 0.019 SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 30 0.95 SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 1.3 SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 29 1.7 SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 29 2.2 SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) 29 2.9 SB_52732| Best HMM Match : M (HMM E-Value=0.019) 28 3.8 SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7 SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01) 27 6.7 SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9 SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) 27 8.9 SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9 SB_37689| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9 SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 27 8.9 SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9 >SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) Length = 750 Score = 60.1 bits (139), Expect = 1e-09 Identities = 29/57 (50%), Positives = 36/57 (63%) Frame = +2 Query: 248 REVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTETXEKNPL 418 + + S+L+H ET+EKN LP KD I EK F +G+E F LKH ET EKNPL Sbjct: 455 KSFEKSKLQHVETKEKNTLPTKDTIADEKRTAPF-SGVEVFQKNKLKHVETLEKNPL 510 Score = 60.1 bits (139), Expect = 1e-09 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Frame = +2 Query: 224 PEVF--IRRYREVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTE 397 PEV + D+S+LKH E QEKNPLP KD I E + + ++ FD + LKH + Sbjct: 674 PEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDITTESTETR--AEVKTFDHSKLKHVQ 731 Query: 398 TXEKNPL 418 T EKNPL Sbjct: 732 TEEKNPL 738 Score = 55.6 bits (128), Expect = 2e-08 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Frame = +2 Query: 248 REVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKF--LNGIENFDPTXLKHTETXEKNPLL 421 + D S+LKH ET EKNPLP ++ E ++ + +FD + LKH E EKNPL Sbjct: 644 KSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLP 703 Query: 422 TK 427 TK Sbjct: 704 TK 705 Score = 55.2 bits (127), Expect = 3e-08 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 2/69 (2%) Frame = +2 Query: 224 PEVFIRRYR--EVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTE 397 PEV R + D+S+LKH ET+EK +P KD IEAE ++ +++FD + LKH Sbjct: 522 PEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSR--AEVKSFDHSKLKHVV 579 Query: 398 TXEKNPLLT 424 T EKNPL T Sbjct: 580 TQEKNPLPT 588 Score = 53.2 bits (122), Expect = 1e-07 Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 2/62 (3%) Frame = +2 Query: 257 DSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLN--GIENFDPTXLKHTETXEKNPLLTKX 430 D++ LKH +T+EKN LP + I+ E + ++F + +++F+ + L+H ET EKN L TK Sbjct: 418 DAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKD 477 Query: 431 VI 436 I Sbjct: 478 TI 479 Score = 50.8 bits (116), Expect = 6e-07 Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 2/60 (3%) Frame = +2 Query: 263 SQLKHTETQEKNPLPDKDAIEAE--KEKNKFLNGIENFDPTXLKHTETXEKNPLLTKXVI 436 ++LKH ET EKNPLPD I AE E + + FD + LKH ET EK + TK VI Sbjct: 497 NKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVI 556 Score = 49.2 bits (112), Expect = 2e-06 Identities = 24/60 (40%), Positives = 39/60 (65%) Frame = +2 Query: 257 DSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHTETXEKNPLLTKXVI 436 D ++LKH TQEK+ +P ++ I+ E ++ +++FD + LKH ET EKNPL + V+ Sbjct: 611 DHTKLKHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVL 668 Score = 47.2 bits (107), Expect = 8e-06 Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = +2 Query: 248 REVDSSQLKHTETQEKNPLPDKDAIEAEK-EKNK-FLNGIENFDPTXLKHTETXEKN 412 + D S+LKH TQEKNPLP + E KNK + + +FD T LKH T EK+ Sbjct: 568 KSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKS 624 Score = 38.7 bits (86), Expect = 0.003 Identities = 16/26 (61%), Positives = 19/26 (73%) Frame = +2 Query: 257 DSSQLKHTETQEKNPLPDKDAIEAEK 334 D S+LKH +T+EKNPLPD I EK Sbjct: 723 DHSKLKHVQTEEKNPLPDAKTIAQEK 748 Score = 33.9 bits (74), Expect = 0.077 Identities = 15/40 (37%), Positives = 28/40 (70%) Frame = +3 Query: 99 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218 +P+V D +S++ F+TS L+ V+T EK+V+P+ + + E Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559 Score = 31.5 bits (68), Expect = 0.41 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = +3 Query: 99 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218 +PK D +S++ F+ + L+ V T EK ++PS ED+ E Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635 >SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) Length = 413 Score = 35.9 bits (79), Expect = 0.019 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = +3 Query: 87 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQKSLFD 242 SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K + S F+ Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFE 385 >SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) Length = 385 Score = 30.3 bits (65), Expect = 0.95 Identities = 20/48 (41%), Positives = 27/48 (56%) Frame = -3 Query: 224 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGS 81 GLL+GD+F R K N+ I VD T G + FEL + + E+ GS Sbjct: 74 GLLAGDIFRRPKANILISVDGV-TKG-DKFELPAKASFPVQEMAGLGS 119 >SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) Length = 1249 Score = 29.9 bits (64), Expect = 1.3 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +3 Query: 69 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 215 S SD P+ D A+D+KS + T DV T++ V PSA DV T Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666 >SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 90 Score = 29.9 bits (64), Expect = 1.3 Identities = 17/32 (53%), Positives = 21/32 (65%) Frame = -3 Query: 224 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 129 GLL+GD+F R K N+ I VD T G + FEL Sbjct: 51 GLLAGDIFRRPKANILISVDGV-TKG-DKFEL 80 >SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) Length = 1064 Score = 29.5 bits (63), Expect = 1.7 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +2 Query: 17 ESSIPFLIKNILIHNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 151 E S+PF N N ++ +P R PQG H + A+ +QH+ Sbjct: 224 EMSLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265 >SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) Length = 446 Score = 29.1 bits (62), Expect = 2.2 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Frame = +2 Query: 218 EDPEVFIRRYREVDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTXLKHT- 394 E VF +R R + + + TET+E NP D +AE+ + G + T K T Sbjct: 274 EGKSVF-KRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTN 332 Query: 395 -ETXEKNPL 418 ET K L Sbjct: 333 METLRKEML 341 >SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) Length = 492 Score = 28.7 bits (61), Expect = 2.9 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -2 Query: 219 SQWRRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLWRPW 103 S WRRLQ+ A S + + D +L A+ G W PW Sbjct: 419 SLWRRLQELNATSLEYRLQPEDPRSIAL-AERLGRWEPW 456 >SB_52732| Best HMM Match : M (HMM E-Value=0.019) Length = 1366 Score = 28.3 bits (60), Expect = 3.8 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 Query: 90 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218 L DL +V +LKS+ EG CL D++ + DV E Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKE 1166 >SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1052 Score = 27.5 bits (58), Expect = 6.7 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -2 Query: 264 LESTSRYRRIKTSGSSQWRRLQQTEAQSFHWCRRHGD 154 L TS Y ++ SGSS RRL+ S+ R GD Sbjct: 38 LSKTSSYGDVELSGSSSRRRLRVMAMSSYRGVRVIGD 74 >SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01) Length = 590 Score = 27.5 bits (58), Expect = 6.7 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +1 Query: 259 FEPAEAHRDSGEEPASGQRCYRSGEG 336 FEP E H DSG+E Y EG Sbjct: 266 FEPMEIHDDSGDEDVDSDDDYDDREG 291 >SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 598 Score = 27.1 bits (57), Expect = 8.9 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Frame = +1 Query: 157 SVTSTPMKRLCFRLLKTSPLRRPRSLY-----STVSRS*FEPAEAHRDSGEEPASGQRCY 321 SVT T +RL R S L PRS+ T+ R A R GEE G+ Y Sbjct: 438 SVTGTFARRLVSRTTDASSLEDPRSVVVTSSPRTLGRISNGTTSARRVEGEEHVCGE--Y 495 Query: 322 RSGEGKEQIP 351 + KE +P Sbjct: 496 KCSLCKEVVP 505 >SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) Length = 781 Score = 27.1 bits (57), Expect = 8.9 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +1 Query: 34 PHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 174 P + + + P P + L P T+ P+ V +ASTP S +P Sbjct: 517 PRNSFAEYEKPLPTLPLSPTNTTTGRPRLSTVPPEASTPTDSFPKSP 563 >SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 959 Score = 27.1 bits (57), Expect = 8.9 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -3 Query: 332 SPLR*HLCPEAGSSPESRCASAGSNQLLDTVE 237 SPL C SSP+S+C + S+ + D E Sbjct: 62 SPLSPESCSIVHSSPDSQCTTPNSSMITDDCE 93 >SB_37689| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 330 Score = 27.1 bits (57), Expect = 8.9 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -3 Query: 191 KHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGSVTHGAGHCE 54 +H + + D+T + V EL V G QGG V H G CE Sbjct: 128 RHIMKMNFDLTPGSSVPHTELNRVVKGWYELYGQGGIVAHKGGDCE 173 >SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) Length = 696 Score = 27.1 bits (57), Expect = 8.9 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -3 Query: 119 VCGDLGEVFQGGSVTHGAGHCESIYF 42 VC D G + G+V++G HC + Y+ Sbjct: 271 VCEDNGRWYLHGAVSYGKLHCPTTYY 296 >SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1884 Score = 27.1 bits (57), Expect = 8.9 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = -1 Query: 178 SLVSTSRRQLVLKPSS*LFRSVATLGRSFREGVSLTEQAIVNQYIFDEEGDRRFVH 11 SLV TS KP L+ VA +GR F V+ T+ + + EEG + H Sbjct: 12 SLVGTSCSNSQEKPIQRLYNVVAVVGRHFTYRVTPTDGS--KNFKITEEGKKTLPH 65 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,224,260 Number of Sequences: 59808 Number of extensions: 262865 Number of successful extensions: 983 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 894 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 974 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1111677931 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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