Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0831
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    25   0.44 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   7.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   7.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   7.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   7.2  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   7.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   7.2  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = -2

Query: 323 VISTSCKISFVVESVVKVS--PNFTRRKVLSRRGN*VTVGCSYFFRFLFQTILN*TRQLE 150
           +I  S +I + + +VV+ S   NF +  ++S   N VT  CS F   + + IL   RQ +
Sbjct: 15  IIFVSLEI-YHIYTVVEESGFENFVKTYLVSDFENYVTFFCSLFIVVILKLILAKYRQQD 73

Query: 149 V-YHRTSAHTNILYS 108
           V   + +   N+LYS
Sbjct: 74  VTLLQITKAKNLLYS 88


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 381 NKVSFH-ILLTIYYYN*WVICNIYIL*DLFCC 289
           NK+  H +LLTI  Y  W I  +Y L  L+ C
Sbjct: 229 NKLYGHQLLLTILTYLIWTIYEMYHLAILWSC 260


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 147 VPSYISPYKHP 115
           VP ++SPY HP
Sbjct: 287 VPYHMSPYGHP 297


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 147 VPSYISPYKHP 115
           VP ++SPY HP
Sbjct: 287 VPYHMSPYGHP 297


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 147 VPSYISPYKHP 115
           VP ++SPY HP
Sbjct: 287 VPYHMSPYGHP 297


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 147 VPSYISPYKHP 115
           VP ++SPY HP
Sbjct: 243 VPYHMSPYGHP 253


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 147 VPSYISPYKHP 115
           VP ++SPY HP
Sbjct: 287 VPYHMSPYGHP 297


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 147 VPSYISPYKHP 115
           VP ++SPY HP
Sbjct: 75  VPYHMSPYGHP 85


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 147 VPSYISPYKHP 115
           VP ++SPY HP
Sbjct: 287 VPYHMSPYGHP 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,249
Number of Sequences: 336
Number of extensions: 3587
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)