BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0831 (687 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 27 2.5 SPBC21B10.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 5.9 SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 5.9 SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 25 7.8 >SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 515 Score = 27.1 bits (57), Expect = 2.5 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -1 Query: 522 FAVNFNSSNGSFTSQG*HSVQTYMKELFPQLFRTE 418 F VN NSS+G ++G HS+ K PQLF E Sbjct: 404 FHVN-NSSSGHNDNEGNHSLILSSKTKSPQLFNNE 437 >SPBC21B10.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 159 Score = 25.8 bits (54), Expect = 5.9 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = +1 Query: 355 EKDMKAHFI----VHDKFEETKYEVFSPEELWKQFLH 453 E D K H I + D+FEE + F P + +K+ +H Sbjct: 59 ESDEKFHPICIDNIPDEFEEIDAKTFDPHQKYKKVIH 95 >SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 426 Score = 25.8 bits (54), Expect = 5.9 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +2 Query: 86 LSKIDTTESTGCLYGLMYDGTLLVVGFSLESFET 187 +S +DTT + GCL G +Y G + F SF T Sbjct: 183 ISCLDTTNAVGCL-GTLY-GQYCIFNFKNGSFST 214 >SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizosaccharomyces pombe|chr 1|||Manual Length = 891 Score = 25.4 bits (53), Expect = 7.8 Identities = 9/24 (37%), Positives = 17/24 (70%) Frame = -3 Query: 100 VDFRQPLNNIT*YFKTCSPGDPLV 29 +D+R+PL++I Y+ +PG L+ Sbjct: 738 MDWREPLHDIIQYYSERTPGSSLI 761 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,772,355 Number of Sequences: 5004 Number of extensions: 56444 Number of successful extensions: 144 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 144 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 317927284 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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