Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0831
         (687 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0460 + 19360075-19360320,19361189-19361368                       33   0.21 
01_01_0104 + 780442-781273,782514-783424                               29   4.6  
09_06_0326 + 22352705-22352764,22352878-22353011,22353160-223532...    28   6.0  

>12_02_0460 + 19360075-19360320,19361189-19361368
          Length = 141

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +3

Query: 510 NSLQNKRKKIASGQVSFHIDSTQVYLFGVASDVGLTGTSTEATVGGLVDSMSPE 671
           N L+   K IASG+ +     T ++L  +A DVG+T       + GLV++ +PE
Sbjct: 57  NKLETIWKGIASGEYTNFSLKTTLFLCSLAEDVGVT-PHVVLVIAGLVEACAPE 109


>01_01_0104 + 780442-781273,782514-783424
          Length = 580

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 145 TIVHQPIQTSCTLCCVDFRQPLNNIT*YFKTCSPGDPLVLERPPP 11
           TI+H PI   C +  +D+++ + NI        P   L+++  PP
Sbjct: 80  TILHHPILGPCKVTSIDYKEAVINIIHLLPFPCPLQKLMVDSLPP 124


>09_06_0326 +
           22352705-22352764,22352878-22353011,22353160-22353228,
           22353978-22354049,22354622-22354694,22354813-22354862,
           22355063-22355135,22355152-22355193
          Length = 190

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -1

Query: 600 TLLQT-NILVYCLYEMTLDLKQSFSSYFAVNFNSSNGSF 487
           T+LQT N+L Y +Y++T+D   SFS +   +  + +GS+
Sbjct: 133 TMLQTDNLLGYGIYDLTVDTNCSFSFHVEHHKAAVDGSW 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,503,253
Number of Sequences: 37544
Number of extensions: 330752
Number of successful extensions: 764
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)