BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0830 (379 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_02_0032 + 10775031-10775520,10775661-10776246,10776333-107769... 29 1.2 12_02_0386 + 18429675-18430679,18431001-18431111,18431139-184311... 29 1.6 07_01_1023 + 8840754-8842988,8843189-8843362 27 3.7 11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888... 27 4.9 02_05_0114 + 25958834-25961296 27 4.9 06_03_1162 + 28093749-28093851,28093939-28093997,28094691-280947... 27 6.5 03_06_0565 + 34747278-34748066,34748170-34748406,34749777-347498... 26 8.6 >06_02_0032 + 10775031-10775520,10775661-10776246,10776333-10776973, 10777270-10777973 Length = 806 Score = 29.1 bits (62), Expect = 1.2 Identities = 12/45 (26%), Positives = 21/45 (46%) Frame = +1 Query: 211 LLQVRSDRSHHCRHYVFIVAFFGCCGAVKENHCMIITFSVFLLII 345 L+Q + HH I+ FG GA C +T S++++ + Sbjct: 455 LVQYKPILKHHILELAMIMDLFGLIGAYSAGSCRDVTTSIYVIAL 499 >12_02_0386 + 18429675-18430679,18431001-18431111,18431139-18431195, 18431552-18431589,18431688-18431733,18431811-18431849 Length = 431 Score = 28.7 bits (61), Expect = 1.6 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +1 Query: 250 HYVFIVAFFGCCGAVKENHCMIITFSV 330 HY +V +G G ++E HC + T V Sbjct: 242 HYACVVDLYGRAGLIEEAHCFVKTMPV 268 >07_01_1023 + 8840754-8842988,8843189-8843362 Length = 802 Score = 27.5 bits (58), Expect = 3.7 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = -1 Query: 160 ANYQDDQSRNGKQKIEAKHEVLYTGHSTFESHCYSIK 50 A +Q++ ++K+E ++ TG T H YS+K Sbjct: 755 AKHQEEILNCNQRKLEVMDSIMLTGKFTHLQHIYSVK 791 >11_06_0621 + 25587476-25587604,25588230-25588423,25588800-25588874, 25589434-25591852 Length = 938 Score = 27.1 bits (57), Expect = 4.9 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +1 Query: 1 GWCESFYSVVIQFG--GNI*LNNNGSRRWNVLCKVPHVLLQSSVCHYGIDH 147 GW + Y + ++ GN+ + + S+ N LC+V +V S+VC ++H Sbjct: 671 GWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEH 721 >02_05_0114 + 25958834-25961296 Length = 820 Score = 27.1 bits (57), Expect = 4.9 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +1 Query: 1 GWCESFYSVVIQFG--GNI*LNNNGSRRWNVLCKVPHVLLQSSVCHYGIDH 147 GW + Y + ++ GN+ + + S+ N LC+V +V S+VC ++H Sbjct: 553 GWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEH 603 >06_03_1162 + 28093749-28093851,28093939-28093997,28094691-28094766, 28094848-28094919,28095023-28095110,28095230-28095485, 28095583-28095698,28096064-28096127,28096252-28096354, 28096446-28096554,28097048-28097234 Length = 410 Score = 26.6 bits (56), Expect = 6.5 Identities = 12/44 (27%), Positives = 20/44 (45%) Frame = +1 Query: 16 FYSVVIQFGGNI*LNNNGSRRWNVLCKVPHVLLQSSVCHYGIDH 147 F+S+ Q+ G + G W+ L K P ++ S +DH Sbjct: 6 FWSIYYQYEGAVNEGQRGPTIWDTLTKRPGRVIDFSNADVAVDH 49 >03_06_0565 + 34747278-34748066,34748170-34748406,34749777-34749869, 34751752-34751988,34752398-34752584,34752956-34753028, 34753145-34753289,34753670-34753779,34754127-34754258, 34754328-34754469,34754545-34754679,34756278-34756435, 34757327-34757401,34757505-34757643,34757838-34757952, 34758016-34758107,34758500-34758613 Length = 990 Score = 26.2 bits (55), Expect = 8.6 Identities = 10/33 (30%), Positives = 18/33 (54%) Frame = +1 Query: 55 LNNNGSRRWNVLCKVPHVLLQSSVCHYGIDHPD 153 LN+ ++L +PH ++ +CH +DH D Sbjct: 862 LNSTCLHNLSLLSDLPHSTNRTHICHVRLDHID 894 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,657,363 Number of Sequences: 37544 Number of extensions: 174736 Number of successful extensions: 394 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 392 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 394 length of database: 14,793,348 effective HSP length: 74 effective length of database: 12,015,092 effective search space used: 612769692 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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