Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0830
(379 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 55 2e-08
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 4e-07
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 49 1e-06
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-06
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 48 3e-06
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 4e-06
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 41 4e-04
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 5e-04
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 39 0.001
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 37 0.005
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 36 0.008
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.008
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 36 0.008
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.008
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.011
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 36 0.011
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 34 0.044
SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_25740| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_43317| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34) 28 2.9
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08) 27 3.8
SB_53036| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73) 27 6.7
SB_27173| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 54.8 bits (126), Expect = 2e-08
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAG 378
+ I+AFFGCCGA KEN CM+I F + LLI+ E+A + G
Sbjct: 417 ITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLG 457
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 50.8 bits (116), Expect = 4e-07
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVG 369
+ +VAF GCCGA KEN CM+I F FLL++ + E+ G
Sbjct: 64 IALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGG 101
Score = 43.6 bits (98), Expect = 5e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 65 MALEGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLII 244
MAL+G + VK L+ FN +F + GLI+ VGI A Y+ N Y P V+I
Sbjct: 1 MALQGSSNIVKILVIIFNFIFFLFGLILFGVGIWASTKLGAYVEIASVN-YATGPRVVIA 59
Query: 245 VGIM 256
VG +
Sbjct: 60 VGFI 63
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 48.8 bits (111), Expect = 1e-06
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGI 372
+ IV+FFGC GA KEN CM+ TF V LLI+ E+A +
Sbjct: 66 IAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAV 104
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 77 GGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGIM 256
G +K L+ FN+LF I G+ ++ VG AE+ ++ + Y ++I VG++
Sbjct: 7 GAGRILKILVVFFNVLFFIFGIALIAVGAWAEVQYGEFIEVSSVP-YATGSRLVIAVGVI 65
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 48.8 bits (111), Expect = 1e-06
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +1
Query: 253 YVFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAEL 360
++ +V+FFGCCGA+KE+ C++ TF L II E+
Sbjct: 335 FIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEI 370
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 47.6 bits (108), Expect = 3e-06
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +2
Query: 65 MALEGGMSCVKYLMFCFNLLFAITGLIILIVGI-----RAEINSYPYMNFTDENFYKFAP 229
M+ + G C+K+++F FNLLF + G I +G+ + E+ + Y T YK AP
Sbjct: 1 MSTDWGFKCIKFMVFFFNLLFLLAGCAIFAIGVWIISSKDEV-AGDYSRLTGTINYKTAP 59
Query: 230 IVLIIVGIM 256
I+ I++GI+
Sbjct: 60 ILCIVIGIV 68
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 262 IVAFFGCCGAVKENHCMIITFSVFLLIIFVAEL 360
IVAF CCGA+KE+ CM+ T+ + IF E+
Sbjct: 71 IVAFLACCGALKESQCMLGTYFGLVTAIFCLEV 103
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 47.2 bits (107), Expect = 4e-06
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGI 372
+FI+ F GC GA++EN C++ FSV L IIF +LA+G+
Sbjct: 57 MFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGV 95
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 40.7 bits (91), Expect = 4e-04
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGI 372
V IV GC +KEN +++++ + L++IF+ E+A G+
Sbjct: 70 VIIVCVVGCVAVIKENRFILVSYLIMLVLIFILEIATGV 108
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 40.3 bits (90), Expect = 5e-04
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 253 YVFIVAFFGCCGAVKENHCMIIT 321
+V V FFGCCGAVKE+ CM+ T
Sbjct: 323 FVTFVGFFGCCGAVKESRCMLAT 345
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 39.1 bits (87), Expect = 0.001
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGI 372
++++ FFGC GA+KEN + ++ +F+ + +A G+
Sbjct: 83 LYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGV 121
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITF--SVFLLIIFV 351
+F + FFGC GA++EN C + + SVFL +I +
Sbjct: 88 MFFIGFFGCVGALRENTCFLTVYGTSVFLCLILL 121
Score = 32.7 bits (71), Expect = 0.10
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 89 CVKYLMFCFNLLFAITGLIILIVGI 163
C KY +F N++F I GL+++ VG+
Sbjct: 27 CTKYTLFFINVIFFILGLLVMTVGV 51
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 36.3 bits (80), Expect = 0.008
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFS 327
V + F GCCGAVKEN C ++ S
Sbjct: 209 VMFIGFVGCCGAVKENKCFLLLVS 232
Score = 30.3 bits (65), Expect = 0.54
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 80 GMSCVKYLMFCFNLLFAITGLI 145
GM C+KYL+F FN +F + +I
Sbjct: 76 GMQCMKYLLFAFNFVFWCSKII 97
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 86 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGIM 256
+C+KY++F N++F + G++IL++G N D Y+ +V++IVGI+
Sbjct: 37 TCIKYILFFVNVVFWVFGVLILVIGSYLMTEFKNAWNL-DSILYE-PSVVILIVGIL 91
Score = 29.9 bits (64), Expect = 0.72
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITF--SVFLLIIFVAELAVGI 372
+F++A GC GA++EN ++ + +V L +IF+ + +
Sbjct: 92 LFLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAV 132
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 86 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGIM 256
+C+KY++F N++F + G++IL++G N D Y+ +V++IVGI+
Sbjct: 37 TCIKYILFFVNVVFWVFGVLILVIGSYLMTEFKNAWNL-DSILYE-PSVVILIVGIL 91
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIA 375
+F++A GC GA++EN ++ + + + + ++ G A
Sbjct: 92 LFLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTA 131
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 36.3 bits (80), Expect = 0.008
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMI 315
+ +++FFGCCGA+KE+ C++
Sbjct: 36 IALISFFGCCGAIKESRCLL 55
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 35.9 bits (79), Expect = 0.011
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 89 CVKYLMFCFNLLFAITGLIILIVGIRAEIN-SYPYMNFTDENFYKFAPIVLIIVGIMF 259
CVKY +F N++F + G +IL VGI I D NF A I L + G++F
Sbjct: 59 CVKYSLFTINVIFWLAGAVILAVGIFIFIEMKEEITKLADLNFQP-AVIFLALGGLLF 115
Score = 34.7 bits (76), Expect = 0.025
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAG 378
+F++ FGC GA++EN C++ + II + G G
Sbjct: 114 LFVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVCGGLG 154
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 35.9 bits (79), Expect = 0.011
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSV 330
+ I+ F GCCGA+KE+ C++ T S+
Sbjct: 85 IAIIGFIGCCGALKEHTCLLKTVSI 109
Score = 31.1 bits (67), Expect = 0.31
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 116 NLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGIM 256
+L+F + GL +L VGI A I YM + + Y A +LI +G +
Sbjct: 39 HLVFQLMGLSVLAVGIWARIQFSDYMKLSSHD-YATAAYILIGIGFL 84
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 33.9 bits (74), Expect = 0.044
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFL 336
+ I+ F GCCGA+KE+ C++ T L
Sbjct: 227 IAIIGFIGCCGALKEHTCLLKTIKTGL 253
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 131 ITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGIM 256
+ GL +L VGI A I YM + + Y A +LI +G +
Sbjct: 186 LMGLSVLAVGIWARIQFSDYMKLSSHD-YATAAYILIGIGFL 226
>SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 30.7 bits (66), Expect = 0.41
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Frame = +1
Query: 238 HHCR----HYVFIVAFF---GC---CGAVKENHCMIITFSVFLLIIFVAELAVGI 372
H CR H+++ F GC C + N C++ T+ F+LI+ VAE+ + +
Sbjct: 13 HGCRTARAHFIYASDLFASAGCLGVCALLYMNPCLLKTYFSFMLILVVAEVTIAV 67
>SB_25740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 678
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 127 CHYGIDHPDSWHQG*NKLVSLHELHR*ELLQVRSDRSHH 243
C+Y + PD+W + + SL R E++ R S+H
Sbjct: 120 CYYSLQPPDNWDKKKTSIQSLCSRERKEVITSRYQTSNH 158
>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 177 FISALMPTIRMINPVMANRRLKQNMRYF 94
FI+ALM I +I +M + L++ M YF
Sbjct: 39 FITALMGNIILITVIMKTKSLRRTMNYF 66
>SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 839
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 169 SPDANYQDDQSRNGKQKIEAKHEVLYTG---HSTFESHC 62
SP ++ RNG+ K+E+ YTG H+ +SHC
Sbjct: 22 SPLHAHKQSHCRNGEPKVESNKVQYYTGSPLHAHKQSHC 60
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = -1
Query: 136 RNGKQKIEAKHEVLYTG---HSTFESHC 62
RNG+ K+E+ YTG H+ +SHC
Sbjct: 5 RNGEPKVESNKVQYYTGSPLHAHKQSHC 32
>SB_43317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 190 VRIRVYFSPDANYQ---DDQSRNGKQKIEAKHEVLYTGHSTFESHCYSIKY 47
+ + +Y + ++ Y+ D+ R GK ++ +KH Y + + CY + Y
Sbjct: 56 LHLHLYDNRESEYRKRIDELEREGKWRLHSKHVTDYNKYIPARAKCYLLTY 106
>SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34)
Length = 750
Score = 27.9 bits (59), Expect = 2.9
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 22 SVVIQFGGNI*LNNNGSRRWNVLCKVPHVLLQSSVCHYGIDHPD-SWHQG*NKLVSLHEL 198
+V + GN+ + + GSR W++ +PH L IDH D +W V+LH++
Sbjct: 127 AVALDMRGNVVVFHRGSRAWDLKFYMPHGLT--------IDHEDNTWITD----VALHQV 174
Query: 199 HR 204
H+
Sbjct: 175 HK 176
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +1
Query: 175 KLVSLHELHR*ELLQVRSDRSHHCRHYVFIVAFFGCCGAVKENHCMIITFSVFLL 339
KL + E ++ +R+ HH ++ +++ AFFG + TF++++L
Sbjct: 422 KLYAWEESFMAKVTGIRNQELHHLKNAMYLNAFFGFTFTCAPFLVSLATFAIYVL 476
>SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08)
Length = 542
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 286 GAVKENHCMIITFSVFLLIIFVAELAVG 369
GA K+N+ ++ +V +IFV E+++G
Sbjct: 82 GAFKQNNRVLTILAVLFFVIFVTEISLG 109
>SB_53036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 27.1 bits (57), Expect = 5.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 265 VAFFGCCGAVKENH 306
+A FGCC A++ENH
Sbjct: 176 LADFGCCQAIEENH 189
>SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)
Length = 150
Score = 26.6 bits (56), Expect = 6.7
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKEN 303
+F+++F GC GA++EN
Sbjct: 29 MFVISFSGCLGALREN 44
>SB_27173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1206
Score = 26.2 bits (55), Expect = 8.8
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -1
Query: 154 YQDDQSRNGKQKIEAKHEVLYTGHSTFESH--CYSI 53
Y D + G+ K H VL H +SH C+SI
Sbjct: 1144 YAIDDRQKGRTKYTGPHHVLTVDHGYTKSHPQCFSI 1179
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,368,744
Number of Sequences: 59808
Number of extensions: 211200
Number of successful extensions: 670
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 632178915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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