Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0830
         (379 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.2  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   2.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -1

Query: 202 GEVHVRIRVYFSPDANYQDDQSRNGKQKIEAKHEVLYTGHSTF 74
           G+V +++R +   D    D  S     K    H  +YTG S F
Sbjct: 733 GQVRIQLRDHLGSDTVAVDGSSIPPLGKFPVIHYEMYTGESFF 775


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -1

Query: 202 GEVHVRIRVYFSPDANYQDDQSRNGKQKIEAKHEVLYTGHSTF 74
           G+V +++R +   D    D  S     K    H  +YTG S F
Sbjct: 734 GQVRIQLRDHLGSDTVAVDGSSIPPLGKFPVIHYEMYTGESFF 776


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +2

Query: 98  YLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGI 253
           YL F F +   I+ +++++V + A         FT+ENF     ++ I   I
Sbjct: 605 YLTFRFWIGTWISIILVVLVAVDASALVCYITRFTEENFACLIAVIFIYKAI 656


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,242
Number of Sequences: 2352
Number of extensions: 7527
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)