Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0830
(379 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g66770.1 68414.m07590 nodulin MtN3 family protein contains Pf... 30 0.59
At1g32400.2 68414.m03998 senescence-associated family protein co... 29 1.0
At1g32400.1 68414.m03997 senescence-associated family protein co... 29 1.0
At5g65850.1 68418.m08287 F-box family protein 27 5.5
At3g06435.1 68416.m00743 Expressed protein 27 5.5
At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phospha... 27 5.5
At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phospha... 27 5.5
At2g21870.2 68415.m02599 expressed protein 27 5.5
At2g21870.1 68415.m02598 expressed protein 27 5.5
At1g63260.2 68414.m07151 senescence-associated family protein si... 27 5.5
At1g63260.1 68414.m07152 senescence-associated family protein si... 27 5.5
At2g02880.1 68415.m00238 mucin-related similar to putative mucin... 26 7.2
At4g22430.1 68417.m03241 hypothetical protein 26 9.6
>At1g66770.1 68414.m07590 nodulin MtN3 family protein contains Pfam
PF03083 MtN3/saliva family; similar to LIM7 (cDNAs
induced in meiotic prophase in lily microsporocytes)
GI:431154 from [Lilium longiflorum]
Length = 261
Score = 29.9 bits (64), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAV 366
VF+ FF CG ++ H ++I+ + + ++FVA LAV
Sbjct: 87 VFLTIFFVFCG--RQQHRLVISAVLTVQVVFVATLAV 121
>At1g32400.2 68414.m03998 senescence-associated family protein
contains Pfam profile PF00335: Tetraspanin family
Length = 280
Score = 29.1 bits (62), Expect = 1.0
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAEL 360
+F+++ GC G + C + +S+ L+++ + EL
Sbjct: 92 LFVISCCGCVGTCSRSVCCLSCYSLLLILLILVEL 126
>At1g32400.1 68414.m03997 senescence-associated family protein
contains Pfam profile PF00335: Tetraspanin family
Length = 280
Score = 29.1 bits (62), Expect = 1.0
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAEL 360
+F+++ GC G + C + +S+ L+++ + EL
Sbjct: 92 LFVISCCGCVGTCSRSVCCLSCYSLLLILLILVEL 126
>At5g65850.1 68418.m08287 F-box family protein
Length = 392
Score = 26.6 bits (56), Expect = 5.5
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 67 GSRRWNVL-CKVPHVLLQSSVCHYGI 141
G W ++ C +PH+L S +C G+
Sbjct: 199 GELSWRIIECSMPHILGMSEICINGV 224
>At3g06435.1 68416.m00743 Expressed protein
Length = 200
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 253 YVFIVAFFGCCGAVKENHCMIIT--FSVFLLIIFVAEL 360
YV ++ FGCC AV T F LL +FV E+
Sbjct: 145 YVVLILLFGCCSAVFAGQYDPKTQPFGFCLLTLFVFEM 182
>At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 74 EGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMN 196
+G +SC+ +++ CF+L GLI I G +EI + M+
Sbjct: 196 QGAVSCL-HMVHCFHLAGFPKGLISCITGKGSEIGDFLTMH 235
>At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 74 EGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMN 196
+G +SC+ +++ CF+L GLI I G +EI + M+
Sbjct: 196 QGAVSCL-HMVHCFHLAGFPKGLISCITGKGSEIGDFLTMH 235
>At2g21870.2 68415.m02599 expressed protein
Length = 220
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -2
Query: 165 LMPTIRMINPVMA-NRRLKQNMRYFTQDIPPSRAIVIQL 52
+M TIR + + ++R+K ++ TQDIP +RA +++L
Sbjct: 86 VMKTIRQKADMFSESQRIKHDIDTETQDIPDARAYLLKL 124
>At2g21870.1 68415.m02598 expressed protein
Length = 240
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -2
Query: 165 LMPTIRMINPVMA-NRRLKQNMRYFTQDIPPSRAIVIQL 52
+M TIR + + ++R+K ++ TQDIP +RA +++L
Sbjct: 86 VMKTIRQKADMFSESQRIKHDIDTETQDIPDARAYLLKL 124
>At1g63260.2 68414.m07151 senescence-associated family protein
similar to senescence-associated protein 5 [Hemerocallis
hybrid cultivar] gi|3551954|gb|AAC34855
Length = 258
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 253 YVFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAEL 360
++F+++ G GA K + ++ + LLI+ +A L
Sbjct: 52 FIFLISIIGFLGACKRSVALLWIYLAVLLIVLIAIL 87
>At1g63260.1 68414.m07152 senescence-associated family protein
similar to senescence-associated protein 5 [Hemerocallis
hybrid cultivar] gi|3551954|gb|AAC34855
Length = 284
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 253 YVFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAEL 360
++F+++ G GA K + ++ + LLI+ +A L
Sbjct: 52 FIFLISIIGFLGACKRSVALLWIYLAVLLIVLIAIL 87
>At2g02880.1 68415.m00238 mucin-related similar to putative mucin
GI:18071389 [Oryza sativa]
Length = 314
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -1
Query: 223 ELVEVLIGEVHVRIRVYFSPDANYQDDQ-SRNGK-QKIEAKHEVLYTGHSTFESHCYSIK 50
E I E+ V + + + D++ ++GK +K E K + + G S YS++
Sbjct: 77 ESTATAIEEIDVEAKAFVEDMNEHWDERRGKSGKVEKREEKKKEIGDGEDESSSSLYSLE 136
Query: 49 YYRQIVLLRNKMIHTS 2
++ L+ + +H S
Sbjct: 137 TMKKDYRLKKQRVHAS 152
>At4g22430.1 68417.m03241 hypothetical protein
Length = 348
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 115 EAKHEVLYTGHSTFESHCYSI 53
E+KH Y H T E H Y I
Sbjct: 278 ESKHHDCYINHRTCEKHMYKI 298
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,868,861
Number of Sequences: 28952
Number of extensions: 145129
Number of successful extensions: 390
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 517767328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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