Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0829
(351 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 0.69
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 0.69
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 23 1.2
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 22 2.1
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 2.8
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 21 2.8
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 21 2.8
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 20 6.4
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 20 6.4
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 20 6.4
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 20 6.4
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 20 6.4
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 20 8.5
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.4 bits (48), Expect = 0.69
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 108 LRKHGFEEN-LMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQ 236
L K N +R ++C E E+ SK N G+K L++
Sbjct: 320 LEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKLADLYK 363
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.4 bits (48), Expect = 0.69
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 108 LRKHGFEEN-LMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQ 236
L K N +R ++C E E+ SK N G+K L++
Sbjct: 212 LEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKLADLYK 255
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 22.6 bits (46), Expect = 1.2
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 84 TRCGLVHELRKHGFEENLMRNWVCLVEHESSRDTS 188
TR L H H + W+ +V ES DTS
Sbjct: 248 TRLFLTHRKPFHPASTQSLSRWIKMVLAESGVDTS 282
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 21.8 bits (44), Expect = 2.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 163 STRHTQFLMRFSSKPCFLSSCTRPHLVNVLASEPTQ 56
S T L R + +LS+ R HL +++ PTQ
Sbjct: 48 SKAQTYELERRFRQQRYLSAPEREHLASIIRLTPTQ 83
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.4 bits (43), Expect = 2.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 126 RSHVSSAHARDRIS*TFWLQNQRRGQPKR 40
R ++SA + W QN+R Q KR
Sbjct: 283 RIEIASALQLNETQVKIWFQNRRMKQKKR 311
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 21.4 bits (43), Expect = 2.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 126 RSHVSSAHARDRIS*TFWLQNQRRGQPKR 40
R ++SA + W QN+R Q KR
Sbjct: 72 RIEIASALQLNETQVKIWFQNRRMKQKKR 100
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 21.4 bits (43), Expect = 2.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 126 RSHVSSAHARDRIS*TFWLQNQRRGQPKR 40
R ++SA + W QN+R Q KR
Sbjct: 72 RIEIASALQLNETQVKIWFQNRRMKQKKR 100
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.2 bits (40), Expect = 6.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 260 CCPVPVVDL 234
CCP P VD+
Sbjct: 193 CCPEPYVDV 201
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.2 bits (40), Expect = 6.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 260 CCPVPVVDL 234
CCP P VD+
Sbjct: 193 CCPEPYVDV 201
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.2 bits (40), Expect = 6.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 260 CCPVPVVDL 234
CCP P VD+
Sbjct: 193 CCPEPYVDV 201
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.2 bits (40), Expect = 6.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 260 CCPVPVVDL 234
CCP P VD+
Sbjct: 193 CCPEPYVDV 201
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.2 bits (40), Expect = 6.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 260 CCPVPVVDL 234
CCP P VD+
Sbjct: 193 CCPEPYVDV 201
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 19.8 bits (39), Expect = 8.5
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 114 KHGFEENLMRNWVCLVEHESSRDTSKT 194
+HG +E ++ VCL + D+ +T
Sbjct: 498 QHGHQELVLGGEVCLWSEQVGPDSLET 524
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,435
Number of Sequences: 336
Number of extensions: 1389
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 6981810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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