BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0829 (351 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_1046 - 9138000-9138293,9139550-9139714,9139862-9140010,914... 28 2.4 02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 27 3.1 05_07_0028 + 27153663-27153932,27154966-27155175,27156220-271564... 27 4.1 04_01_0374 + 4914864-4914947,4915094-4915217,4921146-4921471,492... 27 5.5 12_02_0938 - 24576419-24576719,24576817-24576969,24577052-245778... 26 7.2 08_02_0958 - 23044708-23046045,23046131-23046363,23047059-230471... 26 9.6 08_02_0956 + 23026108-23027146,23027255-23027395,23029334-230295... 26 9.6 04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437... 26 9.6 >07_01_1046 - 9138000-9138293,9139550-9139714,9139862-9140010, 9140363-9140510,9140659-9140727,9140827-9141087, 9141498-9141692,9142932-9143048,9143701-9144477 Length = 724 Score = 27.9 bits (59), Expect = 2.4 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = +2 Query: 107 AEETWLRRKSHEELGMSGRAREQP*HVQDEHEP*RLEGLRIVPD-QRPVLGSKGASP 274 AEE W R S E + M G P +V+ + + G PD VLG+ + P Sbjct: 663 AEENWARYVSPEMVNMRGHLMRYPINVERDGRVGPVHGYECFPDVGGKVLGTHSSLP 719 >02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868, 30560292-30560346,30560537-30560613,30561228-30561315, 30561490-30561593,30562050-30562231,30562347-30563109, 30563195-30563438,30564513-30564658,30565158-30565283, 30565404-30565517,30565595-30565762,30566283-30566528, 30566605-30566767,30566970-30567064,30567274-30567357, 30567769-30568055,30568359-30568572,30568923-30569140, 30569386-30569623,30570312-30571118,30571202-30571301, 30571694-30571737,30571824-30571973 Length = 1942 Score = 27.5 bits (58), Expect = 3.1 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = -3 Query: 184 VSRLLSCSTRHTQFLMRFSSKPCFLSSCTRPHLV-NVLASEPTQRTTKAKIINF 26 V +L S T Q ++R + L+ R +V N L+S+P + T KII+F Sbjct: 476 VDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISF 529 >05_07_0028 + 27153663-27153932,27154966-27155175,27156220-27156414, 27156491-27156840,27157198-27157423,27157524-27157692, 27158145-27158990,27159647-27159818,27159934-27160052, 27160117-27160155,27161033-27161157,27161250-27161309, 27161471-27161542,27161980-27162114 Length = 995 Score = 27.1 bits (57), Expect = 4.1 Identities = 19/60 (31%), Positives = 26/60 (43%) Frame = -3 Query: 331 CLSNVVSQEVGALNVAVFAWTGAFAAQYRSLIWNNP*SFEPLRFVFVLDVSRLLSCSTRH 152 CL +V E L VFAW G A + S + +P S +R +D + CS H Sbjct: 212 CLHKIVPDEK-LLQQVVFAWIGGEAVKTISHDFCSPCSKSNVRCKDAIDQTDKYGCSHEH 270 >04_01_0374 + 4914864-4914947,4915094-4915217,4921146-4921471, 4921527-4921658,4921824-4922362,4922445-4922597, 4922695-4922995 Length = 552 Score = 26.6 bits (56), Expect = 5.5 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +3 Query: 108 LRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYWAAKAPVQAK 281 L H +E +MR+W+ LV + + T N N SKDY +I A P K Sbjct: 443 LWSHQDKEYIMRHWILLV--IVPKWSRVTYLNSNKSKDYDFTEITKALNMAWGPYVEK 498 >12_02_0938 - 24576419-24576719,24576817-24576969,24577052-24577884, 24577966-24578427,24578506-24579213 Length = 818 Score = 26.2 bits (55), Expect = 7.2 Identities = 18/55 (32%), Positives = 25/55 (45%) Frame = +3 Query: 117 HGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYWAAKAPVQAK 281 H +E +MR+W+ LV + + T N N SKDY +I A P K Sbjct: 712 HQDKEYIMRHWILLV--IVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGPYVEK 764 >08_02_0958 - 23044708-23046045,23046131-23046363,23047059-23047199, 23047296-23048334 Length = 916 Score = 25.8 bits (54), Expect = 9.6 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -3 Query: 304 VGALNVAVFAWTGAFAAQYRSLIWN 230 +GA +AV AW + Q LIWN Sbjct: 445 LGAKEIAVRAWDQSHNTQPEKLIWN 469 >08_02_0956 + 23026108-23027146,23027255-23027395,23029334-23029566, 23029652-23030989 Length = 916 Score = 25.8 bits (54), Expect = 9.6 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -3 Query: 304 VGALNVAVFAWTGAFAAQYRSLIWN 230 +GA +AV AW + Q LIWN Sbjct: 445 LGAKEIAVRAWDQSHNTQPEKLIWN 469 >04_04_1105 - 30942735-30942791,30943116-30943466,30943670-30943762, 30943869-30944072,30944155-30944399,30945019-30945877, 30946070-30946936,30947113-30947562 Length = 1041 Score = 25.8 bits (54), Expect = 9.6 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -2 Query: 158 QTYPVPHEIFFEAMFPQLMHETAS 87 Q P+ HE++ EA +L++ETA+ Sbjct: 273 QEGPLSHEVYREASHAELIYETAT 296 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,821,722 Number of Sequences: 37544 Number of extensions: 158754 Number of successful extensions: 454 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 450 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 454 length of database: 14,793,348 effective HSP length: 73 effective length of database: 12,052,636 effective search space used: 518263348 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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