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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0829
         (351 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1046 - 9138000-9138293,9139550-9139714,9139862-9140010,914...    28   2.4  
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598...    27   3.1  
05_07_0028 + 27153663-27153932,27154966-27155175,27156220-271564...    27   4.1  
04_01_0374 + 4914864-4914947,4915094-4915217,4921146-4921471,492...    27   5.5  
12_02_0938 - 24576419-24576719,24576817-24576969,24577052-245778...    26   7.2  
08_02_0958 - 23044708-23046045,23046131-23046363,23047059-230471...    26   9.6  
08_02_0956 + 23026108-23027146,23027255-23027395,23029334-230295...    26   9.6  
04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437...    26   9.6  

>07_01_1046 -
           9138000-9138293,9139550-9139714,9139862-9140010,
           9140363-9140510,9140659-9140727,9140827-9141087,
           9141498-9141692,9142932-9143048,9143701-9144477
          Length = 724

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +2

Query: 107 AEETWLRRKSHEELGMSGRAREQP*HVQDEHEP*RLEGLRIVPD-QRPVLGSKGASP 274
           AEE W R  S E + M G     P +V+ +     + G    PD    VLG+  + P
Sbjct: 663 AEENWARYVSPEMVNMRGHLMRYPINVERDGRVGPVHGYECFPDVGGKVLGTHSSLP 719


>02_05_0640 -
           30558523-30559027,30559123-30559252,30559388-30559868,
           30560292-30560346,30560537-30560613,30561228-30561315,
           30561490-30561593,30562050-30562231,30562347-30563109,
           30563195-30563438,30564513-30564658,30565158-30565283,
           30565404-30565517,30565595-30565762,30566283-30566528,
           30566605-30566767,30566970-30567064,30567274-30567357,
           30567769-30568055,30568359-30568572,30568923-30569140,
           30569386-30569623,30570312-30571118,30571202-30571301,
           30571694-30571737,30571824-30571973
          Length = 1942

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -3

Query: 184 VSRLLSCSTRHTQFLMRFSSKPCFLSSCTRPHLV-NVLASEPTQRTTKAKIINF 26
           V +L S  T   Q ++R +     L+   R  +V N L+S+P +  T  KII+F
Sbjct: 476 VDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISF 529


>05_07_0028 +
           27153663-27153932,27154966-27155175,27156220-27156414,
           27156491-27156840,27157198-27157423,27157524-27157692,
           27158145-27158990,27159647-27159818,27159934-27160052,
           27160117-27160155,27161033-27161157,27161250-27161309,
           27161471-27161542,27161980-27162114
          Length = 995

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = -3

Query: 331 CLSNVVSQEVGALNVAVFAWTGAFAAQYRSLIWNNP*SFEPLRFVFVLDVSRLLSCSTRH 152
           CL  +V  E   L   VFAW G  A +  S  + +P S   +R    +D +    CS  H
Sbjct: 212 CLHKIVPDEK-LLQQVVFAWIGGEAVKTISHDFCSPCSKSNVRCKDAIDQTDKYGCSHEH 270


>04_01_0374 +
           4914864-4914947,4915094-4915217,4921146-4921471,
           4921527-4921658,4921824-4922362,4922445-4922597,
           4922695-4922995
          Length = 552

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +3

Query: 108 LRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYWAAKAPVQAK 281
           L  H  +E +MR+W+ LV     + +  T  N N SKDY   +I      A  P   K
Sbjct: 443 LWSHQDKEYIMRHWILLV--IVPKWSRVTYLNSNKSKDYDFTEITKALNMAWGPYVEK 498


>12_02_0938 -
           24576419-24576719,24576817-24576969,24577052-24577884,
           24577966-24578427,24578506-24579213
          Length = 818

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 117 HGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYWAAKAPVQAK 281
           H  +E +MR+W+ LV     + +  T  N N SKDY   +I      A  P   K
Sbjct: 712 HQDKEYIMRHWILLV--IVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGPYVEK 764


>08_02_0958 -
           23044708-23046045,23046131-23046363,23047059-23047199,
           23047296-23048334
          Length = 916

 Score = 25.8 bits (54), Expect = 9.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 304 VGALNVAVFAWTGAFAAQYRSLIWN 230
           +GA  +AV AW  +   Q   LIWN
Sbjct: 445 LGAKEIAVRAWDQSHNTQPEKLIWN 469


>08_02_0956 +
           23026108-23027146,23027255-23027395,23029334-23029566,
           23029652-23030989
          Length = 916

 Score = 25.8 bits (54), Expect = 9.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 304 VGALNVAVFAWTGAFAAQYRSLIWN 230
           +GA  +AV AW  +   Q   LIWN
Sbjct: 445 LGAKEIAVRAWDQSHNTQPEKLIWN 469


>04_04_1105 -
           30942735-30942791,30943116-30943466,30943670-30943762,
           30943869-30944072,30944155-30944399,30945019-30945877,
           30946070-30946936,30947113-30947562
          Length = 1041

 Score = 25.8 bits (54), Expect = 9.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 158 QTYPVPHEIFFEAMFPQLMHETAS 87
           Q  P+ HE++ EA   +L++ETA+
Sbjct: 273 QEGPLSHEVYREASHAELIYETAT 296


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,821,722
Number of Sequences: 37544
Number of extensions: 158754
Number of successful extensions: 454
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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