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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0829
         (351 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15782| Best HMM Match : DUF845 (HMM E-Value=5.8)                    29   0.80 
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)                    29   1.1  
SB_20525| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)                27   3.2  
SB_27810| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.2  
SB_43663| Best HMM Match : F-box (HMM E-Value=4e-07)                   27   4.3  
SB_29980| Best HMM Match : E-MAP-115 (HMM E-Value=1.3)                 27   4.3  
SB_59062| Best HMM Match : Brevenin (HMM E-Value=0.39)                 27   4.3  
SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   5.7  
SB_56871| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.5  
SB_32123| Best HMM Match : Keratin_B2 (HMM E-Value=0.019)              26   7.5  
SB_49297| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.9  

>SB_15782| Best HMM Match : DUF845 (HMM E-Value=5.8)
          Length = 283

 Score = 29.5 bits (63), Expect = 0.80
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 120 GFEENLMRNWVCLVEHESSRDTSKTN 197
           GFEE + R W+   + E S D +KTN
Sbjct: 33  GFEEEVKRQWIGCDKLEGSNDITKTN 58


>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
          Length = 334

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 113 ETWLRRKSHEELGMSGRAREQP*HVQDEHEP 205
           E WL RK H E  +S   RE+   V+++H+P
Sbjct: 223 EAWLERKEHREDSLSEHEREE---VKNKHKP 250


>SB_20525| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
          Length = 1145

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -3

Query: 187 DVSRLLSCSTRHTQFLMRFSSK-PCFL--SSCTRPHLVNVLASEPTQRTTKAKIINFCIS 17
           D  +   C++   Q L+    K PC     SC +  + +V A E  Q TT AK ++ C S
Sbjct: 98  DQRKAKCCNSGEHQSLISEDEKLPCLSVKKSCFKEGIASVPAKETDQVTTTAKDVSDCCS 157


>SB_27810| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 102 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSK 218
           H  RKH F  N+ R+ +    HE+ ++  K +  R  +K
Sbjct: 61  HRRRKHIFRHNVRRSGISGESHENRKNKKKEHKKRMHAK 99


>SB_43663| Best HMM Match : F-box (HMM E-Value=4e-07)
          Length = 717

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 90  CGLVHELRKHGFEENLMRNWVCLVEHESSRDTSKTNT 200
           CG  H L  H  EE  +R + CL   + S   S +N+
Sbjct: 596 CGYGHALTDHVLEEMAVRKYACLEIMDVSYSNSISNS 632


>SB_29980| Best HMM Match : E-MAP-115 (HMM E-Value=1.3)
          Length = 215

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 113 ETWLRRKSHEELGMSGRAREQP*HVQDEHEP*RLEGLR 226
           E W+RRK  E L    RAR +     +E    R E LR
Sbjct: 162 EEWMRRKDQEALEREERARREAEQKYEEKRKRREEVLR 199


>SB_59062| Best HMM Match : Brevenin (HMM E-Value=0.39)
          Length = 214

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 130 SSKPCFLSSCTRPHLVNVLASEPTQRTTKAKIINFCISIVS 8
           SS PC+     RP L  ++  +  Q T  A +I  CI +++
Sbjct: 43  SSTPCWHILKDRPRLCEIIHGQKAQYTIIALVIIDCIIVIA 83


>SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 218 GLRIVPDQRPVLGSKGASPGKDCNVKCSDLLTDDITK 328
           G++I+P    +      SP K  N+K     TDDI K
Sbjct: 54  GIKILPKSEGIPNGDHTSPLKISNIKVKQEPTDDILK 90


>SB_56871| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 311

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -3

Query: 184 VSRLLSCSTRHTQFLMRFSS-KPCF 113
           V + LSC  RHT  +++ SS +PC+
Sbjct: 157 VMQTLSCRPRHTDLVIQTSSYRPCY 181


>SB_32123| Best HMM Match : Keratin_B2 (HMM E-Value=0.019)
          Length = 1097

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -3

Query: 184 VSRLLSCSTRHTQFLMRFSS-KPCF 113
           V + LSC  RHT  +++ SS +PC+
Sbjct: 51  VMQTLSCRPRHTDLVIQTSSYRPCY 75


>SB_49297| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 117

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 90  CGLVHELRKHGFEENLMRNWVCLVEHESSRDTSK 191
           CG   EL++   +E +   W+C  E    +D +K
Sbjct: 41  CGSCDELKQFKMDEIVKNCWLCCHEEGDGQDAAK 74


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,120,538
Number of Sequences: 59808
Number of extensions: 187988
Number of successful extensions: 475
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 535585339
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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