BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0829 (351 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U64844-12|AAB18312.4| 417|Caenorhabditis elegans Hypothetical p... 27 2.9 AL110487-11|CAC42369.1| 624|Caenorhabditis elegans Hypothetical... 27 3.8 AL110487-10|CAC42368.1| 623|Caenorhabditis elegans Hypothetical... 27 3.8 AL110487-9|CAB54435.1| 626|Caenorhabditis elegans Hypothetical ... 27 3.8 AL132858-1|CAB60474.1| 325|Caenorhabditis elegans Hypothetical ... 27 5.0 AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical... 27 5.0 AF031837-1|AAC13673.1| 624|Caenorhabditis elegans GLY5c protein. 26 6.6 AF031836-1|AAC13672.1| 626|Caenorhabditis elegans GLY5b protein. 26 6.6 AF031835-1|AAC13671.1| 623|Caenorhabditis elegans GLY5a protein. 26 6.6 AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine re... 26 6.6 AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical ... 26 8.7 >U64844-12|AAB18312.4| 417|Caenorhabditis elegans Hypothetical protein T22F3.10 protein. Length = 417 Score = 27.5 bits (58), Expect = 2.9 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +3 Query: 21 MQKLIIFALVVLCVGSEAKTFTRCGLVH 104 M L F L + C+G + F +CG++H Sbjct: 309 MLSLSFFILTMCCIGVNSGGFYKCGVLH 336 >AL110487-11|CAC42369.1| 624|Caenorhabditis elegans Hypothetical protein Y39E4B.12c protein. Length = 624 Score = 27.1 bits (57), Expect = 3.8 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = +3 Query: 120 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYW 254 GF+ L NW + E + T + R+ + GLF I+ +Y+ Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKYF 363 >AL110487-10|CAC42368.1| 623|Caenorhabditis elegans Hypothetical protein Y39E4B.12b protein. Length = 623 Score = 27.1 bits (57), Expect = 3.8 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = +3 Query: 120 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYW 254 GF+ L NW + E + T + R+ + GLF I+ +Y+ Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKYF 363 >AL110487-9|CAB54435.1| 626|Caenorhabditis elegans Hypothetical protein Y39E4B.12a protein. Length = 626 Score = 27.1 bits (57), Expect = 3.8 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = +3 Query: 120 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYW 254 GF+ L NW + E + T + R+ + GLF I+ +Y+ Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKYF 363 >AL132858-1|CAB60474.1| 325|Caenorhabditis elegans Hypothetical protein Y113G7A.1 protein. Length = 325 Score = 26.6 bits (56), Expect = 5.0 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +3 Query: 3 SKDTIEMQKLIIFALVV 53 SK TI+MQ L+IFAL++ Sbjct: 224 SKKTIQMQHLLIFALIL 240 >AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical protein F25E5.10 protein. Length = 401 Score = 26.6 bits (56), Expect = 5.0 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +2 Query: 248 VLGSKGASPGKDCNVKCSDLLTDDI 322 V GS G PG CN C + DDI Sbjct: 344 VTGSDGTCPGNPCNGLCVEEDDDDI 368 >AF031837-1|AAC13673.1| 624|Caenorhabditis elegans GLY5c protein. Length = 624 Score = 26.2 bits (55), Expect = 6.6 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +3 Query: 120 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYW 254 GF+ L NW + E + T + R+ + GLF I+ Y+ Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKEYF 363 >AF031836-1|AAC13672.1| 626|Caenorhabditis elegans GLY5b protein. Length = 626 Score = 26.2 bits (55), Expect = 6.6 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +3 Query: 120 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYW 254 GF+ L NW + E + T + R+ + GLF I+ Y+ Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKEYF 363 >AF031835-1|AAC13671.1| 623|Caenorhabditis elegans GLY5a protein. Length = 623 Score = 26.2 bits (55), Expect = 6.6 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +3 Query: 120 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYW 254 GF+ L NW + E + T + R+ + GLF I+ Y+ Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKEYF 363 >AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine receptor, class g (gamma)protein 65 protein. Length = 316 Score = 26.2 bits (55), Expect = 6.6 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = -3 Query: 145 FLMRFSS--KPCFLSSCTRPHLVNVLASEPTQRTTKAKIINFCISIVSF 5 FLM FS K F L+N+L T + + +++ FCI I+ F Sbjct: 41 FLMGFSKVYKNAFYKLVQMDLLINLLVYTNTLLSLRLELLPFCIFILKF 89 >AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical protein Y42G9A.4b protein. Length = 614 Score = 25.8 bits (54), Expect = 8.7 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +3 Query: 75 KTFTRCG-LVHELRKHGFEENLMRNWVCLVEHESSRDTS 188 K T CG LV L +G +E ++R V + E SRDTS Sbjct: 11 KVVTVCGELVRSLDANG-KEMVIRREVSVTETRESRDTS 48 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,427,364 Number of Sequences: 27780 Number of extensions: 133137 Number of successful extensions: 433 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 432 length of database: 12,740,198 effective HSP length: 72 effective length of database: 10,740,038 effective search space used: 472561672 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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