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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0829
         (351 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g33985.1 68417.m04822 expressed protein                             29   1.2  
At3g13590.1 68416.m01711 DC1 domain-containing protein contains ...    27   2.7  
At4g37360.1 68417.m05291 cytochrome P450 family protein cytochro...    27   4.6  
At3g03980.1 68416.m00419 short-chain dehydrogenase/reductase (SD...    27   4.6  
At2g37370.1 68415.m04583 hypothetical protein                          26   6.1  
At2g19640.2 68415.m02295 SET domain-containing protein contains ...    26   6.1  
At2g19640.1 68415.m02294 SET domain-containing protein contains ...    26   6.1  
At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to ...    26   6.1  
At4g19940.1 68417.m02921 F-box family protein contains Pfam PF00...    26   8.1  
At4g02120.1 68417.m00283 CTP synthase, putative / UTP--ammonia l...    26   8.1  

>At4g33985.1 68417.m04822 expressed protein
          Length = 154

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 83  HEMRSRA*AEETWLRRKSHEELGMSGRAR 169
           H     A  EE WLR+K  + LG  GR++
Sbjct: 19  HSWSPDADREEAWLRKKGKQSLGRLGRSK 47


>At3g13590.1 68416.m01711 DC1 domain-containing protein contains
           Pfam protein PF03107 DC1 domain
          Length = 513

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -3

Query: 160 TRHTQFLMRFSSKPCFLS---SCTRPHLVNVLASEPTQRTTKAKIINFCISIVSFD 2
           TR+   L + SSK    S   S    HLVNV   E + R ++  I   C S VSF+
Sbjct: 6   TRNMMTLSKRSSKTKTGSVWFSYLEEHLVNVHIFEESPRDSRDAICKLCKSTVSFE 61


>At4g37360.1 68417.m05291 cytochrome P450 family protein cytochrome
           P450 monooxygenase, Arabidopsis thaliana, PID:d1029478
          Length = 499

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 271 TGAFAAQYRSLIWNNP*SFEPLRF 200
           T A+A     L+W++P SF+P RF
Sbjct: 392 TNAWAIHRDPLLWDDPTSFKPERF 415


>At3g03980.1 68416.m00419 short-chain dehydrogenase/reductase (SDR)
           family protein similar to short-chain type
           dehydrogenase/reductase SP:Q08632 [Picea abies]
          Length = 270

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 149 PVPHEIFFEAMFPQLMHETASRERFGFRTNAED 51
           P+  E+FF+   P+L+ + A+   FG    A+D
Sbjct: 210 PIATEMFFDGKTPELVEKIAAESPFGRVGEAKD 242


>At2g37370.1 68415.m04583 hypothetical protein
          Length = 697

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 105 ELRKHGFEENLMRNWVCLVEHESSRDTSKT 194
           ++  H   E L +  V ++EH SS D SKT
Sbjct: 230 DIEAHTLMEKLDKTKVKVLEHASSEDASKT 259


>At2g19640.2 68415.m02295 SET domain-containing protein contains
           Pfam profile PF00856: SET domain
          Length = 398

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -3

Query: 142 LMRFSSKPCFLSSCTRP---HLVNVLASEPTQRTTKAKIINFC 23
           L+ +S+ P FLSS   P   H   +LAS   Q+     +++FC
Sbjct: 43  LLLYSAFP-FLSSSVSPYCDHCFRLLASSAHQKCQSCSLVSFC 84


>At2g19640.1 68415.m02294 SET domain-containing protein contains
           Pfam profile PF00856: SET domain
          Length = 341

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -3

Query: 142 LMRFSSKPCFLSSCTRP---HLVNVLASEPTQRTTKAKIINFC 23
           L+ +S+ P FLSS   P   H   +LAS   Q+     +++FC
Sbjct: 43  LLLYSAFP-FLSSSVSPYCDHCFRLLASSAHQKCQSCSLVSFC 84


>At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to
           SP|P11832 Nitrate reductase 1 (formerly EC 1.6.6.1)
           (NR1){Arabidopsis thaliana}
          Length = 917

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 304 VGALNVAVFAWTGAFAAQYRSLIWN 230
           + A +VAV AW  +F  Q   LIWN
Sbjct: 450 LSAKDVAVRAWDESFNTQPDKLIWN 474


>At4g19940.1 68417.m02921 F-box family protein contains Pfam
           PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box
           protein interaction domain;similar to F-box protein Fbx8
           (GI:6164735) [Homo
           sapiens]|8737673|gb|AV566223.1|AV566223
          Length = 411

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -3

Query: 208 LRFVFVLDVSRLLSCSTRHTQFLMRFSSKP---CFLSSCTRPHLVNVLAS 68
           +RF  V  +   L CS   T  L++ SS P     LSS    HL  VL S
Sbjct: 53  MRFKSVSKLWSSLICSRNFTNRLLKLSSPPRLFMCLSSSDNSHLKTVLLS 102


>At4g02120.1 68417.m00283 CTP synthase, putative / UTP--ammonia
           ligase, putative similar to SP|P17812 CTP synthase (EC
           6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains
           Pfam profile PF00117: glutamine amidotransferase class-I
          Length = 556

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 94  PHLVNVLASEPTQRTTKAKIINFC 23
           PH +   +++P   +TKAK+  FC
Sbjct: 211 PHFLACRSAQPLLESTKAKLSQFC 234


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,004,133
Number of Sequences: 28952
Number of extensions: 125175
Number of successful extensions: 397
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 439384704
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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