BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0829 (351 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g33985.1 68417.m04822 expressed protein 29 1.2 At3g13590.1 68416.m01711 DC1 domain-containing protein contains ... 27 2.7 At4g37360.1 68417.m05291 cytochrome P450 family protein cytochro... 27 4.6 At3g03980.1 68416.m00419 short-chain dehydrogenase/reductase (SD... 27 4.6 At2g37370.1 68415.m04583 hypothetical protein 26 6.1 At2g19640.2 68415.m02295 SET domain-containing protein contains ... 26 6.1 At2g19640.1 68415.m02294 SET domain-containing protein contains ... 26 6.1 At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to ... 26 6.1 At4g19940.1 68417.m02921 F-box family protein contains Pfam PF00... 26 8.1 At4g02120.1 68417.m00283 CTP synthase, putative / UTP--ammonia l... 26 8.1 >At4g33985.1 68417.m04822 expressed protein Length = 154 Score = 28.7 bits (61), Expect = 1.2 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 83 HEMRSRA*AEETWLRRKSHEELGMSGRAR 169 H A EE WLR+K + LG GR++ Sbjct: 19 HSWSPDADREEAWLRKKGKQSLGRLGRSK 47 >At3g13590.1 68416.m01711 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain Length = 513 Score = 27.5 bits (58), Expect = 2.7 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = -3 Query: 160 TRHTQFLMRFSSKPCFLS---SCTRPHLVNVLASEPTQRTTKAKIINFCISIVSFD 2 TR+ L + SSK S S HLVNV E + R ++ I C S VSF+ Sbjct: 6 TRNMMTLSKRSSKTKTGSVWFSYLEEHLVNVHIFEESPRDSRDAICKLCKSTVSFE 61 >At4g37360.1 68417.m05291 cytochrome P450 family protein cytochrome P450 monooxygenase, Arabidopsis thaliana, PID:d1029478 Length = 499 Score = 26.6 bits (56), Expect = 4.6 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -3 Query: 271 TGAFAAQYRSLIWNNP*SFEPLRF 200 T A+A L+W++P SF+P RF Sbjct: 392 TNAWAIHRDPLLWDDPTSFKPERF 415 >At3g03980.1 68416.m00419 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain type dehydrogenase/reductase SP:Q08632 [Picea abies] Length = 270 Score = 26.6 bits (56), Expect = 4.6 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -2 Query: 149 PVPHEIFFEAMFPQLMHETASRERFGFRTNAED 51 P+ E+FF+ P+L+ + A+ FG A+D Sbjct: 210 PIATEMFFDGKTPELVEKIAAESPFGRVGEAKD 242 >At2g37370.1 68415.m04583 hypothetical protein Length = 697 Score = 26.2 bits (55), Expect = 6.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 105 ELRKHGFEENLMRNWVCLVEHESSRDTSKT 194 ++ H E L + V ++EH SS D SKT Sbjct: 230 DIEAHTLMEKLDKTKVKVLEHASSEDASKT 259 >At2g19640.2 68415.m02295 SET domain-containing protein contains Pfam profile PF00856: SET domain Length = 398 Score = 26.2 bits (55), Expect = 6.1 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = -3 Query: 142 LMRFSSKPCFLSSCTRP---HLVNVLASEPTQRTTKAKIINFC 23 L+ +S+ P FLSS P H +LAS Q+ +++FC Sbjct: 43 LLLYSAFP-FLSSSVSPYCDHCFRLLASSAHQKCQSCSLVSFC 84 >At2g19640.1 68415.m02294 SET domain-containing protein contains Pfam profile PF00856: SET domain Length = 341 Score = 26.2 bits (55), Expect = 6.1 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = -3 Query: 142 LMRFSSKPCFLSSCTRP---HLVNVLASEPTQRTTKAKIINFC 23 L+ +S+ P FLSS P H +LAS Q+ +++FC Sbjct: 43 LLLYSAFP-FLSSSVSPYCDHCFRLLASSAHQKCQSCSLVSFC 84 >At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to SP|P11832 Nitrate reductase 1 (formerly EC 1.6.6.1) (NR1){Arabidopsis thaliana} Length = 917 Score = 26.2 bits (55), Expect = 6.1 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -3 Query: 304 VGALNVAVFAWTGAFAAQYRSLIWN 230 + A +VAV AW +F Q LIWN Sbjct: 450 LSAKDVAVRAWDESFNTQPDKLIWN 474 >At4g19940.1 68417.m02921 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain;similar to F-box protein Fbx8 (GI:6164735) [Homo sapiens]|8737673|gb|AV566223.1|AV566223 Length = 411 Score = 25.8 bits (54), Expect = 8.1 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = -3 Query: 208 LRFVFVLDVSRLLSCSTRHTQFLMRFSSKP---CFLSSCTRPHLVNVLAS 68 +RF V + L CS T L++ SS P LSS HL VL S Sbjct: 53 MRFKSVSKLWSSLICSRNFTNRLLKLSSPPRLFMCLSSSDNSHLKTVLLS 102 >At4g02120.1 68417.m00283 CTP synthase, putative / UTP--ammonia ligase, putative similar to SP|P17812 CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains Pfam profile PF00117: glutamine amidotransferase class-I Length = 556 Score = 25.8 bits (54), Expect = 8.1 Identities = 9/24 (37%), Positives = 15/24 (62%) Frame = -3 Query: 94 PHLVNVLASEPTQRTTKAKIINFC 23 PH + +++P +TKAK+ FC Sbjct: 211 PHFLACRSAQPLLESTKAKLSQFC 234 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,004,133 Number of Sequences: 28952 Number of extensions: 125175 Number of successful extensions: 397 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 395 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 397 length of database: 12,070,560 effective HSP length: 72 effective length of database: 9,986,016 effective search space used: 439384704 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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