Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0826
         (447 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.33 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.33 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   0.75 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   4.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   9.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   9.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   9.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    20   9.3  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.33
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 274 TTYKMVESQLSDSFNLDGILSELGQ 348
           TT+K+V   L +   +D  L+ELGQ
Sbjct: 93  TTFKLVAKTLENMTKIDKDLTELGQ 117


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 0.33
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 274 TTYKMVESQLSDSFNLDGILSELGQ 348
           TT+K+V   L +   +D  L+ELGQ
Sbjct: 93  TTFKLVAKTLENMTKIDKDLTELGQ 117


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 447 FISGENIIENXQFAGKXSLNDTSSKNS 367
           FI+G  IIEN + A   +  D  +KNS
Sbjct: 560 FINGTLIIENVERASDQATYDCVAKNS 586


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 252 VQSLFTIIRVCT*INSTEF 196
           +QSL+ + ++CT  ++ EF
Sbjct: 277 IQSLWVLEKICTTTDAAEF 295


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 265 GTTTTYKMVESQLSDS 312
           GTTTTY +V  Q + S
Sbjct: 361 GTTTTYFIVILQFNQS 376


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 265 GTTTTYKMVESQLSDS 312
           GTTTTY +V  Q + S
Sbjct: 361 GTTTTYFIVILQFNQS 376


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +1

Query: 10  TCRATTRDQRAVYKWTLSTRVALIHP 87
           T +    D+R  Y WT     A + P
Sbjct: 47  TSKLVPPDERITYSWTEINAFANVSP 72


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +1

Query: 10  TCRATTRDQRAVYKWTLSTRVALIHP 87
           T +    D+R  Y WT     A + P
Sbjct: 47  TSKLVPPDERITYSWTEINAFANVSP 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,197
Number of Sequences: 336
Number of extensions: 1280
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)