Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0824
(503 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p pro... 86 2e-17
AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA... 86 2e-17
AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9 signalo... 85 7e-17
BT022388-1|AAY54804.1| 364|Drosophila melanogaster IP11532p pro... 59 3e-09
AE014134-2521|AAF53409.1| 364|Drosophila melanogaster CG4697-PA... 59 3e-09
AY069486-1|AAL39631.1| 355|Drosophila melanogaster LD21768p pro... 28 6.2
AE013599-1382|AAM71025.2| 357|Drosophila melanogaster CG8889-PB... 28 6.2
AE013599-1381|AAF58594.2| 355|Drosophila melanogaster CG8889-PA... 28 6.2
>AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p
protein.
Length = 525
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +1
Query: 244 PHLGLETYAASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKLS 423
P + LE YA Y G +L+RL++VAD CP L +EALKMAI+YV TTYNVNLY LHK+LS
Sbjct: 41 PSIDLEVYANQYAGIVRLHRLIYVADVCPVLAVEALKMAITYVQTTYNVNLYQVLHKRLS 100
Query: 424 E 426
+
Sbjct: 101 D 101
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/39 (61%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 PPIMFEMNTAEPMQVDIPP--EDNENNETECYVVENPTL 253
PP+M N EPMQVDI P EDNENNE + VVENP++
Sbjct: 7 PPLM--QNAVEPMQVDIAPPNEDNENNEEQQIVVENPSI 43
>AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA
protein.
Length = 525
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +1
Query: 244 PHLGLETYAASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKLS 423
P + LE YA Y G +L+RL++VAD CP L +EALKMAI+YV TTYNVNLY LHK+LS
Sbjct: 41 PSIDLEVYANQYAGIVRLHRLIYVADVCPVLAVEALKMAITYVQTTYNVNLYQVLHKRLS 100
Query: 424 E 426
+
Sbjct: 101 D 101
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/39 (61%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 PPIMFEMNTAEPMQVDIPP--EDNENNETECYVVENPTL 253
PP+M N EPMQVDI P EDNENNE + VVENP++
Sbjct: 7 PPLM--QNAVEPMQVDIAPPNEDNENNEEQQIVVENPSI 43
>AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9
signalosome subunit 1 CSN1 protein.
Length = 525
Score = 84.6 bits (200), Expect = 7e-17
Identities = 37/61 (60%), Positives = 47/61 (77%)
Frame = +1
Query: 244 PHLGLETYAASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKLS 423
P + LE +A Y G +L+RL++VAD CP L +EALKMAI+YV TTYNVNLY LHK+LS
Sbjct: 41 PSIDLEVFANQYAGIVRLHRLIYVADVCPVLAVEALKMAITYVQTTYNVNLYQVLHKRLS 100
Query: 424 E 426
+
Sbjct: 101 D 101
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/39 (61%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 PPIMFEMNTAEPMQVDIPP--EDNENNETECYVVENPTL 253
PP+M N EPMQVDI P EDNENNE + VVENP++
Sbjct: 7 PPLM--QNAVEPMQVDIAPPNEDNENNEEQQIVVENPSI 43
>BT022388-1|AAY54804.1| 364|Drosophila melanogaster IP11532p
protein.
Length = 364
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +1
Query: 250 LGLETYAASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKL 420
L L +YA YT +L RL F+A CP L + AL++A+++V TTYNV LY L+K L
Sbjct: 9 LHLPSYADRYTDIPRLIRLKFIAQVCPELSVLALELALNHVKTTYNVKLYDELYKTL 65
>AE014134-2521|AAF53409.1| 364|Drosophila melanogaster CG4697-PA
protein.
Length = 364
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +1
Query: 250 LGLETYAASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKL 420
L L +YA YT +L RL F+A CP L + AL++A+++V TTYNV LY L+K L
Sbjct: 9 LHLPSYADRYTDIPRLIRLKFIAQVCPELSVLALELALNHVKTTYNVKLYDELYKTL 65
>AY069486-1|AAL39631.1| 355|Drosophila melanogaster LD21768p
protein.
Length = 355
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
Frame = -3
Query: 63 TTLLVFFNKYLYHYV--SSWQ 7
T LLVFFN+++ +Y+ SSWQ
Sbjct: 19 TLLLVFFNEFIVYYMAQSSWQ 39
>AE013599-1382|AAM71025.2| 357|Drosophila melanogaster CG8889-PB,
isoform B protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
Frame = -3
Query: 63 TTLLVFFNKYLYHYV--SSWQ 7
T LLVFFN+++ +Y+ SSWQ
Sbjct: 21 TLLLVFFNEFIVYYMAQSSWQ 41
>AE013599-1381|AAF58594.2| 355|Drosophila melanogaster CG8889-PA,
isoform A protein.
Length = 355
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
Frame = -3
Query: 63 TTLLVFFNKYLYHYV--SSWQ 7
T LLVFFN+++ +Y+ SSWQ
Sbjct: 19 TLLLVFFNEFIVYYMAQSSWQ 39
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,640,132
Number of Sequences: 53049
Number of extensions: 490677
Number of successful extensions: 1099
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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