BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0824 (503 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132895-1|CAC14399.1| 601|Caenorhabditis elegans Hypothetical ... 43 1e-04 U41276-3|AAA82470.2| 517|Caenorhabditis elegans Hypothetical pr... 29 1.4 U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical pr... 29 2.5 AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 29 2.5 AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical ... 28 3.3 L16621-6|AAA28229.1| 67|Caenorhabditis elegans Hypothetical pr... 28 4.4 U64852-5|AAB04968.1| 746|Caenorhabditis elegans Hypothetical pr... 27 5.8 U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 27 5.8 DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 27 5.8 AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 27 5.8 AF077534-7|AAK71376.1| 319|Caenorhabditis elegans Prion-like-(q... 27 5.8 AC024770-1|AAF59482.1| 261|Caenorhabditis elegans Hypothetical ... 27 5.8 Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical pr... 27 7.7 >AL132895-1|CAC14399.1| 601|Caenorhabditis elegans Hypothetical protein Y59A8A.1 protein. Length = 601 Score = 42.7 bits (96), Expect = 1e-04 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = +1 Query: 250 LGLETYAASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMT-TYNVNLYHTLHKKLSE 426 + +E+ A SY A R F+A HCP LR +A I+Y+ T ++ Y +L Sbjct: 84 IDIESLACSYDSNAFFLRARFIARHCPILRADAYISLINYLKEHTTDITHYVAFFNELES 143 Query: 427 AVASAGLPDIAGSQDIPVLDTIWVE 501 +A + + IP+ D W+E Sbjct: 144 ELARKEFKNRQLNFQIPLRDQKWIE 168 >U41276-3|AAA82470.2| 517|Caenorhabditis elegans Hypothetical protein C52B11.3 protein. Length = 517 Score = 29.5 bits (63), Expect = 1.4 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 5/53 (9%) Frame = +2 Query: 170 AEPMQVDIPPEDNENNETECYVVENPT-LVWKHTLRHI----LVLQNFIGSCL 313 AE + + + P + N+T + E P +VW+H L I + L G+CL Sbjct: 10 AEDLYITMTPSVSTENDTTVWATEEPAAIVWRHPLLAIALFSICLLTVAGNCL 62 >U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical protein T19A5.1 protein. Length = 1280 Score = 28.7 bits (61), Expect = 2.5 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -1 Query: 200 LGEYQPALVQLCSFRTLLEGFRPFLMKIREIYC 102 +G+YQ AL S +L F+P KIR IYC Sbjct: 1240 IGDYQRALNFYYSTLSLQANFQPAKDKIRTIYC 1272 >AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical protein Y56A3A.4 protein. Length = 342 Score = 28.7 bits (61), Expect = 2.5 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +2 Query: 140 NPPIMFEMNTAEPMQVDIPPEDNEN-NETE 226 NP I ++T PMQ IPP+ ++N NE + Sbjct: 21 NPQIAAALSTNSPMQQGIPPQGHQNPNEQQ 50 >AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical protein Y70G10A.3 protein. Length = 690 Score = 28.3 bits (60), Expect = 3.3 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -3 Query: 207 LSSGGISTCIGSAVFISNIIGGF*AFFNENTRNLLSTMKTNSS 79 LS+ CI +F S II GF AF + LLST T +S Sbjct: 329 LSNPTFLVCIFVGIFESIIINGFAAFMPKILETLLSTNPTLAS 371 >L16621-6|AAA28229.1| 67|Caenorhabditis elegans Hypothetical protein ZK688.4 protein. Length = 67 Score = 27.9 bits (59), Expect = 4.4 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = -3 Query: 234 T*HSVSLFSLSSGGISTCIGSAVFISNIIGGF*AFFNENTRNLLSTMKTNSSENRNFTTL 55 T HSVS F + S I + SAV ++ FF E R ST N+N TT+ Sbjct: 9 TVHSVSNFYIFSSTI--LLTSAVILAIFFFFGDGFFREKYRREFSTNSKEKDGNKNLTTV 66 >U64852-5|AAB04968.1| 746|Caenorhabditis elegans Hypothetical protein W01A11.5 protein. Length = 746 Score = 27.5 bits (58), Expect = 5.8 Identities = 14/53 (26%), Positives = 22/53 (41%) Frame = -2 Query: 385 YMWS*HRIWPFSKLPIAMTDSGLLQT*AYKVLQNQYMTQRMFPNQGGVFNDVA 227 Y W + +WP +P T L T YK +N + + P G ++A Sbjct: 31 YNWIENTLWPIKPIPFVATTVALAATLHYKYPENAILD--LLPKFGSEVAEIA 81 >U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel type/putative nematodecalcium channel protein 2 protein. Length = 1785 Score = 27.5 bits (58), Expect = 5.8 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 161 MNTAEPMQVDIPPEDNENNETECYVVENPTLVWKHTLRHILVLQN 295 + A+P+ V PP+ E+ + CY+ + T W L +LV+ N Sbjct: 1223 LKMAQPLHV--PPKPPESAKLRCYLYDLTTSRWFKQLFAVLVVVN 1265 >DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type voltage-gatedion channel alpha-1 subunit protein. Length = 1763 Score = 27.5 bits (58), Expect = 5.8 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 161 MNTAEPMQVDIPPEDNENNETECYVVENPTLVWKHTLRHILVLQN 295 + A+P+ V PP+ E+ + CY+ + T W L +LV+ N Sbjct: 1201 LKMAQPLHV--PPKPPESAKLRCYLYDLTTSRWFKQLFAVLVVVN 1243 >AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type voltage-gatedion channel alpha-1 subunit protein. Length = 1785 Score = 27.5 bits (58), Expect = 5.8 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 161 MNTAEPMQVDIPPEDNENNETECYVVENPTLVWKHTLRHILVLQN 295 + A+P+ V PP+ E+ + CY+ + T W L +LV+ N Sbjct: 1223 LKMAQPLHV--PPKPPESAKLRCYLYDLTTSRWFKQLFAVLVVVN 1265 >AF077534-7|AAK71376.1| 319|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 48 protein. Length = 319 Score = 27.5 bits (58), Expect = 5.8 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = -2 Query: 271 QRMFPNQ-GGVFNDVAFRLIVFIIFWGNINL---HWFSCVH 161 Q+ NQ G VFN +LI+ ++ WGN + FSC H Sbjct: 155 QKFIANQLGSVFNQFQGQLILELVPWGNSRIMRDGSFSCNH 195 >AC024770-1|AAF59482.1| 261|Caenorhabditis elegans Hypothetical protein Y39H10A.4 protein. Length = 261 Score = 27.5 bits (58), Expect = 5.8 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +2 Query: 101 DSKFRVFSLKKA*NPPIMFEMNTAEPMQVDIPP 199 D +FRV + ++ NP +F++ P+ V +PP Sbjct: 100 DYQFRVIIVIRSSNPAAVFDIIRPRPIPVQLPP 132 >Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical protein ZK662.5 protein. Length = 598 Score = 27.1 bits (57), Expect = 7.7 Identities = 9/29 (31%), Positives = 15/29 (51%) Frame = +2 Query: 227 CYVVENPTLVWKHTLRHILVLQNFIGSCL 313 C +E PT + T H++ LQ + C+ Sbjct: 309 CDRIEQPTYISDETFNHLIYLQRLLQKCM 337 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,862,107 Number of Sequences: 27780 Number of extensions: 257387 Number of successful extensions: 714 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 689 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 713 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 967231538 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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