BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0824 (503 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 4.2 EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 4.2 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.2 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.2 Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 5.5 DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 5.5 AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 5.5 DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 7.3 EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6 EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6 EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6 EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6 EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6 EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6 DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.6 DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.6 AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 9.6 >EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. Length = 686 Score = 21.8 bits (44), Expect = 4.2 Identities = 8/21 (38%), Positives = 14/21 (66%) Frame = +1 Query: 334 LRLEALKMAISYVMTTYNVNL 396 LRL+A + ++Y TY +N+ Sbjct: 487 LRLKARRACMNYERFTYKINI 507 >EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. Length = 686 Score = 21.8 bits (44), Expect = 4.2 Identities = 8/21 (38%), Positives = 14/21 (66%) Frame = +1 Query: 334 LRLEALKMAISYVMTTYNVNL 396 LRL+A + ++Y TY +N+ Sbjct: 487 LRLKARRACMNYERFTYKINI 507 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 21.8 bits (44), Expect = 4.2 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%) Frame = +2 Query: 188 DIPPEDNENNETECYV--VENPTLVWK 262 D+ E N++ C V PT+VWK Sbjct: 718 DVSVERNKHVALHCQAQGVPTPTIVWK 744 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 21.8 bits (44), Expect = 4.2 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%) Frame = +2 Query: 188 DIPPEDNENNETECYV--VENPTLVWK 262 D+ E N++ C V PT+VWK Sbjct: 714 DVSVERNKHVALHCQAQGVPTPTIVWK 740 >Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP57-2 protein. Length = 464 Score = 21.4 bits (43), Expect = 5.5 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Frame = -2 Query: 289 QNQYMTQRMFPNQGGVFNDVAFRLIVFIIFWGNIN--LHWFSCVHFEH 152 +N+Y+ NQ + ND+ + F I N+N + C +F++ Sbjct: 372 RNEYLLALSDRNQNVLNNDLNLEHVNFQILGANVNDLIRNSRCANFDN 419 >DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly protein 9 protein. Length = 423 Score = 21.4 bits (43), Expect = 5.5 Identities = 6/11 (54%), Positives = 10/11 (90%) Frame = -2 Query: 121 KYAKFTVNDEN 89 +Y K+T+NDE+ Sbjct: 233 RYTKYTINDES 243 >AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly protein MRJP5 protein. Length = 598 Score = 21.4 bits (43), Expect = 5.5 Identities = 11/34 (32%), Positives = 15/34 (44%) Frame = -2 Query: 286 NQYMTQRMFPNQGGVFNDVAFRLIVFIIFWGNIN 185 N+YM Q + ND F + F I N+N Sbjct: 542 NEYMMALSMKLQKFINNDYNFNEVNFRILGANVN 575 >DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine receptor beta2subunit protein. Length = 427 Score = 21.0 bits (42), Expect = 7.3 Identities = 7/23 (30%), Positives = 12/23 (52%) Frame = +2 Query: 200 EDNENNETECYVVENPTLVWKHT 268 E NE++ T ++ W+HT Sbjct: 371 EMNEDDNTSLVSLDKKQYTWRHT 393 >EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 6 protein. Length = 461 Score = 20.6 bits (41), Expect = 9.6 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +2 Query: 329 RHCDWKL*KWPY 364 +HCD K W Y Sbjct: 123 QHCDMKFGSWTY 134 >EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 461 Score = 20.6 bits (41), Expect = 9.6 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +2 Query: 329 RHCDWKL*KWPY 364 +HCD K W Y Sbjct: 123 QHCDMKFGSWTY 134 >EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 461 Score = 20.6 bits (41), Expect = 9.6 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +2 Query: 329 RHCDWKL*KWPY 364 +HCD K W Y Sbjct: 123 QHCDMKFGSWTY 134 >EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 461 Score = 20.6 bits (41), Expect = 9.6 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +2 Query: 329 RHCDWKL*KWPY 364 +HCD K W Y Sbjct: 123 QHCDMKFGSWTY 134 >EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 461 Score = 20.6 bits (41), Expect = 9.6 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +2 Query: 329 RHCDWKL*KWPY 364 +HCD K W Y Sbjct: 123 QHCDMKFGSWTY 134 >EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 461 Score = 20.6 bits (41), Expect = 9.6 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +2 Query: 329 RHCDWKL*KWPY 364 +HCD K W Y Sbjct: 123 QHCDMKFGSWTY 134 >DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 20.6 bits (41), Expect = 9.6 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +2 Query: 329 RHCDWKL*KWPY 364 +HCD K W Y Sbjct: 191 QHCDMKFGSWTY 202 >DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 20.6 bits (41), Expect = 9.6 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +2 Query: 329 RHCDWKL*KWPY 364 +HCD K W Y Sbjct: 191 QHCDMKFGSWTY 202 >AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly protein MRJP6 protein. Length = 437 Score = 20.6 bits (41), Expect = 9.6 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = -2 Query: 298 KVLQNQYMTQRMFPNQGGVFNDVAFRLIVFIIFWGNIN 185 ++ +N+YM Q V ND F + F I N+N Sbjct: 372 RIHKNEYMLALSNRMQKIVNNDFNFDEVNFRILGANVN 409 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 142,350 Number of Sequences: 438 Number of extensions: 3259 Number of successful extensions: 17 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 13864083 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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