Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0824
(503 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 4.2
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 4.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.2
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 5.5
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 5.5
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 5.5
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 7.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.6
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 9.6
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 334 LRLEALKMAISYVMTTYNVNL 396
LRL+A + ++Y TY +N+
Sbjct: 487 LRLKARRACMNYERFTYKINI 507
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 334 LRLEALKMAISYVMTTYNVNL 396
LRL+A + ++Y TY +N+
Sbjct: 487 LRLKARRACMNYERFTYKINI 507
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 4.2
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 188 DIPPEDNENNETECYV--VENPTLVWK 262
D+ E N++ C V PT+VWK
Sbjct: 718 DVSVERNKHVALHCQAQGVPTPTIVWK 744
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 4.2
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 188 DIPPEDNENNETECYV--VENPTLVWK 262
D+ E N++ C V PT+VWK
Sbjct: 714 DVSVERNKHVALHCQAQGVPTPTIVWK 740
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 5.5
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 289 QNQYMTQRMFPNQGGVFNDVAFRLIVFIIFWGNIN--LHWFSCVHFEH 152
+N+Y+ NQ + ND+ + F I N+N + C +F++
Sbjct: 372 RNEYLLALSDRNQNVLNNDLNLEHVNFQILGANVNDLIRNSRCANFDN 419
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.4 bits (43), Expect = 5.5
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -2
Query: 121 KYAKFTVNDEN 89
+Y K+T+NDE+
Sbjct: 233 RYTKYTINDES 243
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 5.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 286 NQYMTQRMFPNQGGVFNDVAFRLIVFIIFWGNIN 185
N+YM Q + ND F + F I N+N
Sbjct: 542 NEYMMALSMKLQKFINNDYNFNEVNFRILGANVN 575
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +2
Query: 200 EDNENNETECYVVENPTLVWKHT 268
E NE++ T ++ W+HT
Sbjct: 371 EMNEDDNTSLVSLDKKQYTWRHT 393
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 329 RHCDWKL*KWPY 364
+HCD K W Y
Sbjct: 123 QHCDMKFGSWTY 134
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 329 RHCDWKL*KWPY 364
+HCD K W Y
Sbjct: 123 QHCDMKFGSWTY 134
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 329 RHCDWKL*KWPY 364
+HCD K W Y
Sbjct: 123 QHCDMKFGSWTY 134
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 329 RHCDWKL*KWPY 364
+HCD K W Y
Sbjct: 123 QHCDMKFGSWTY 134
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 329 RHCDWKL*KWPY 364
+HCD K W Y
Sbjct: 123 QHCDMKFGSWTY 134
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 329 RHCDWKL*KWPY 364
+HCD K W Y
Sbjct: 123 QHCDMKFGSWTY 134
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 329 RHCDWKL*KWPY 364
+HCD K W Y
Sbjct: 191 QHCDMKFGSWTY 202
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 329 RHCDWKL*KWPY 364
+HCD K W Y
Sbjct: 191 QHCDMKFGSWTY 202
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 20.6 bits (41), Expect = 9.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 298 KVLQNQYMTQRMFPNQGGVFNDVAFRLIVFIIFWGNIN 185
++ +N+YM Q V ND F + F I N+N
Sbjct: 372 RIHKNEYMLALSNRMQKIVNNDFNFDEVNFRILGANVN 409
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,350
Number of Sequences: 438
Number of extensions: 3259
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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