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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0824
         (503 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.2  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   5.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   5.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   5.5  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   7.3  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   9.6  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   9.6  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   9.6  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 334 LRLEALKMAISYVMTTYNVNL 396
           LRL+A +  ++Y   TY +N+
Sbjct: 487 LRLKARRACMNYERFTYKINI 507


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 334 LRLEALKMAISYVMTTYNVNL 396
           LRL+A +  ++Y   TY +N+
Sbjct: 487 LRLKARRACMNYERFTYKINI 507


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = +2

Query: 188 DIPPEDNENNETECYV--VENPTLVWK 262
           D+  E N++    C    V  PT+VWK
Sbjct: 718 DVSVERNKHVALHCQAQGVPTPTIVWK 744


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = +2

Query: 188 DIPPEDNENNETECYV--VENPTLVWK 262
           D+  E N++    C    V  PT+VWK
Sbjct: 714 DVSVERNKHVALHCQAQGVPTPTIVWK 740


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = -2

Query: 289 QNQYMTQRMFPNQGGVFNDVAFRLIVFIIFWGNIN--LHWFSCVHFEH 152
           +N+Y+      NQ  + ND+    + F I   N+N  +    C +F++
Sbjct: 372 RNEYLLALSDRNQNVLNNDLNLEHVNFQILGANVNDLIRNSRCANFDN 419


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 121 KYAKFTVNDEN 89
           +Y K+T+NDE+
Sbjct: 233 RYTKYTINDES 243


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 286 NQYMTQRMFPNQGGVFNDVAFRLIVFIIFWGNIN 185
           N+YM       Q  + ND  F  + F I   N+N
Sbjct: 542 NEYMMALSMKLQKFINNDYNFNEVNFRILGANVN 575


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 200 EDNENNETECYVVENPTLVWKHT 268
           E NE++ T    ++     W+HT
Sbjct: 371 EMNEDDNTSLVSLDKKQYTWRHT 393


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 329 RHCDWKL*KWPY 364
           +HCD K   W Y
Sbjct: 123 QHCDMKFGSWTY 134


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 329 RHCDWKL*KWPY 364
           +HCD K   W Y
Sbjct: 123 QHCDMKFGSWTY 134


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 329 RHCDWKL*KWPY 364
           +HCD K   W Y
Sbjct: 123 QHCDMKFGSWTY 134


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 329 RHCDWKL*KWPY 364
           +HCD K   W Y
Sbjct: 123 QHCDMKFGSWTY 134


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 329 RHCDWKL*KWPY 364
           +HCD K   W Y
Sbjct: 123 QHCDMKFGSWTY 134


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 329 RHCDWKL*KWPY 364
           +HCD K   W Y
Sbjct: 123 QHCDMKFGSWTY 134


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 329 RHCDWKL*KWPY 364
           +HCD K   W Y
Sbjct: 191 QHCDMKFGSWTY 202


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 329 RHCDWKL*KWPY 364
           +HCD K   W Y
Sbjct: 191 QHCDMKFGSWTY 202


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 298 KVLQNQYMTQRMFPNQGGVFNDVAFRLIVFIIFWGNIN 185
           ++ +N+YM       Q  V ND  F  + F I   N+N
Sbjct: 372 RIHKNEYMLALSNRMQKIVNNDFNFDEVNFRILGANVN 409


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,350
Number of Sequences: 438
Number of extensions: 3259
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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