Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0823
(601 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 100 2e-22
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 78 1e-15
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 61 1e-10
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 58 7e-10
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 52 5e-08
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 46 3e-06
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 42 7e-05
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 36 0.005
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 34 0.014
SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 29 0.69
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 3.7
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 26 4.8
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 100 bits (239), Expect = 2e-22
Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436
FYAPWCGHCK+LAPEY AA +L E+ I L +VD T+E DL Y +RGYPTL F+N
Sbjct: 46 FYAPWCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKN 103
Query: 437 GXPI-DYSGGRQADDIISWLKKKTWP 511
G I YSG R+ D ++ +++K+ P
Sbjct: 104 GKQISQYSGPRKHDALVKYMRKQLLP 129
Score = 75.4 bits (177), Expect = 6e-15
Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Frame = +2
Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436
FYAPWCGHCK+LAP Y K A + + ++S + +AK+DAT E D+ S + G+PT+ FF+
Sbjct: 380 FYAPWCGHCKNLAPTYEKLAEEYS-DDSNVVVAKIDAT-ENDI--SVSISGFPTIMFFKA 435
Query: 437 G---XPIDYSGGRQADDIISWL-KKKTWPPAVEVTSAEQAKELID 559
P+ Y G R +D+ +++ K ++ P + + A +L D
Sbjct: 436 NDKVNPVRYEGDRTLEDLSAFIDKHASFEPIKKEKESVPAPDLED 480
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 77.8 bits (183), Expect = 1e-15
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-- 430
FYA WCGHCKSLAP Y + L E+ + + + K+DA D+A+ Y + G+PTL +F
Sbjct: 46 FYATWCGHCKSLAPVYEELGA-LFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPP 104
Query: 431 RNGXPIDYSGGRQADDIISWLKKKT 505
P+ YS R D + ++ +KT
Sbjct: 105 DGSEPVQYSNARDVDSLTQFVSEKT 129
Score = 63.3 bits (147), Expect = 3e-11
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +2
Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-- 430
FYA WCG+CK LAP Y + K+ + E +++ K++A D+ + V +PT+KFF
Sbjct: 165 FYADWCGYCKRLAPTY-ETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPK 223
Query: 431 -RNGXPIDYSGGRQADDIISWLKKKT 505
P Y G R + +I ++ KK+
Sbjct: 224 DDKDKPELYEGDRSLESLIEYINKKS 249
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 60.9 bits (141), Expect = 1e-10
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Frame = +2
Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-- 430
FYAPWCG+CK L P Y K A+ L P+ DA Q + + Y V+G+PT+K
Sbjct: 55 FYAPWCGYCKKLVPTYQKLASNL-HSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYP 113
Query: 431 -RNGXPI---DYSGGRQADDIISWLKKKTWPPAVEV--TSAEQAKELIDAHN 568
G + DY+G R + ++ P V++ + A+ K + DA N
Sbjct: 114 SSKGSSLSSTDYNGDRSYKSLQKFVSDSI-PSKVKILTSEAKTQKFIQDAQN 164
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 58.4 bits (135), Expect = 7e-10
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +2
Query: 260 YAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG 439
YA WCG CK+++P +++ A+K A + AKV+ +++ +A GV+ PT FF NG
Sbjct: 27 YADWCGPCKAISPLFSQLASKYASPK--FVFAKVNVDEQRQIASGLGVKAMPTFVFFENG 84
Query: 440 XPIDYSGG 463
ID G
Sbjct: 85 KQIDMLTG 92
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 52.4 bits (120), Expect = 5e-08
Identities = 29/81 (35%), Positives = 38/81 (46%)
Frame = +2
Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436
FYA WCG CK L P KL+E+ V+A + D+A+ GV PT+ FR
Sbjct: 42 FYADWCGPCKYLKP----FLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRK 97
Query: 437 GXPIDYSGGRQADDIISWLKK 499
G +D G + S L K
Sbjct: 98 GQELDRIVGADVKTLSSLLAK 118
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 46.4 bits (105), Expect = 3e-06
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +2
Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436
F+A WCG CK++AP++ + + S KVD Q ++A GV P+ ++N
Sbjct: 25 FFATWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLYKN 80
Query: 437 GXPID 451
G I+
Sbjct: 81 GEKIE 85
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 41.9 bits (94), Expect = 7e-05
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 239 GVHFS*FYAPWCGHCKSLAPEYAKAATKLAE--EESPIKLAKVDATQEQDLAESYGVRGY 412
G F +Y P CG CK L P + K E E S +VD ++E L+ +R
Sbjct: 43 GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKE--LSSCANIRAV 100
Query: 413 PTLKFFRNGXPID 451
PTL ++NG ++
Sbjct: 101 PTLYLYQNGEIVE 113
Score = 34.3 bits (75), Expect = 0.014
Identities = 15/81 (18%), Positives = 38/81 (46%)
Frame = +2
Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436
FY+ C C ++ + A ++ + +A ++ + + Y ++ +PT FF+
Sbjct: 305 FYSSECDDCDDVSTAWYAMANRM---RGKLNVAHINCAVSKRACKQYSIQYFPTFLFFKE 361
Query: 437 GXPIDYSGGRQADDIISWLKK 499
++Y G D++S+ ++
Sbjct: 362 EAFVEYVGLPNEGDLVSFAEE 382
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 35.9 bits (79), Expect = 0.005
Identities = 15/87 (17%), Positives = 43/87 (49%)
Frame = +2
Query: 278 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGXPIDYS 457
HC+ A ++ + +K+A+V+ +E+++ + ++ +PT + F+ I Y+
Sbjct: 208 HCEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYN 267
Query: 458 GGRQADDIISWLKKKTWPPAVEVTSAE 538
G + ++S+ + A+++ +
Sbjct: 268 GPLKYQQLLSYSNQVASYQAIKIEEGD 294
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +2
Query: 383 LAESYGVRGYPTLKFFRNGXPIDYSG--GRQADD---IISWLKKKTWPPAVEVT 529
LA YG + P++ RNG PI Y R+ D I W+ + P E+T
Sbjct: 343 LANKYGAQSQPSIIAVRNGMPIVYQAITPREFRDYKRITEWINIVSSPFITELT 396
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 34.3 bits (75), Expect = 0.014
Identities = 20/98 (20%), Positives = 39/98 (39%)
Frame = +2
Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436
FYAPW CK + + + A++ K++A + D+AES+ V P
Sbjct: 27 FYAPWAAPCKQMNQVF----DQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPLFVLIHG 82
Query: 437 GXPIDYSGGRQADDIISWLKKKTWPPAVEVTSAEQAKE 550
+ G + + + + P +++S + E
Sbjct: 83 AKVLARISGANPQKLKAAIDEYIQPLISQISSTNASVE 120
>SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 318
Score = 28.7 bits (61), Expect = 0.69
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +2
Query: 278 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGXPIDYS 457
+C L P +AA L + +SP L VDA + L S+GVR + G +
Sbjct: 183 YCAYLVPNEHEAAILLNQADSPATLENVDAYASKLL--SFGVRKAVIITLGSQGAYYKSA 240
Query: 458 GGRQADDIISWLKKKTWPPAVEVTSA 535
G A ++S K K AV+ T+A
Sbjct: 241 NGESA--LVSACKVK----AVDTTAA 260
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 369 VASTFASLIGDSSSASFVAALAYSGARDLQW 277
V++ F SL+G S FVA + R L+W
Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3
Query: 125 NTHCDIIGTFLL 90
NTHCDI+ +FLL
Sbjct: 275 NTHCDIVTSFLL 286
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,310,764
Number of Sequences: 5004
Number of extensions: 42603
Number of successful extensions: 120
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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