BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0823 (601 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 100 2e-22 SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 78 1e-15 SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 61 1e-10 SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 58 7e-10 SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 52 5e-08 SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 46 3e-06 SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 42 7e-05 SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 36 0.005 SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 34 0.014 SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 29 0.69 SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 3.7 SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 26 4.8 >SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 492 Score = 100 bits (239), Expect = 2e-22 Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 1/86 (1%) Frame = +2 Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436 FYAPWCGHCK+LAPEY AA +L E+ I L +VD T+E DL Y +RGYPTL F+N Sbjct: 46 FYAPWCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKN 103 Query: 437 GXPI-DYSGGRQADDIISWLKKKTWP 511 G I YSG R+ D ++ +++K+ P Sbjct: 104 GKQISQYSGPRKHDALVKYMRKQLLP 129 Score = 75.4 bits (177), Expect = 6e-15 Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 4/105 (3%) Frame = +2 Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436 FYAPWCGHCK+LAP Y K A + + ++S + +AK+DAT E D+ S + G+PT+ FF+ Sbjct: 380 FYAPWCGHCKNLAPTYEKLAEEYS-DDSNVVVAKIDAT-ENDI--SVSISGFPTIMFFKA 435 Query: 437 G---XPIDYSGGRQADDIISWL-KKKTWPPAVEVTSAEQAKELID 559 P+ Y G R +D+ +++ K ++ P + + A +L D Sbjct: 436 NDKVNPVRYEGDRTLEDLSAFIDKHASFEPIKKEKESVPAPDLED 480 >SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 359 Score = 77.8 bits (183), Expect = 1e-15 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 2/85 (2%) Frame = +2 Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-- 430 FYA WCGHCKSLAP Y + L E+ + + + K+DA D+A+ Y + G+PTL +F Sbjct: 46 FYATWCGHCKSLAPVYEELGA-LFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPP 104 Query: 431 RNGXPIDYSGGRQADDIISWLKKKT 505 P+ YS R D + ++ +KT Sbjct: 105 DGSEPVQYSNARDVDSLTQFVSEKT 129 Score = 63.3 bits (147), Expect = 3e-11 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Frame = +2 Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-- 430 FYA WCG+CK LAP Y + K+ + E +++ K++A D+ + V +PT+KFF Sbjct: 165 FYADWCGYCKRLAPTY-ETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPK 223 Query: 431 -RNGXPIDYSGGRQADDIISWLKKKT 505 P Y G R + +I ++ KK+ Sbjct: 224 DDKDKPELYEGDRSLESLIEYINKKS 249 >SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 363 Score = 60.9 bits (141), Expect = 1e-10 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 8/112 (7%) Frame = +2 Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-- 430 FYAPWCG+CK L P Y K A+ L P+ DA Q + + Y V+G+PT+K Sbjct: 55 FYAPWCGYCKKLVPTYQKLASNL-HSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYP 113 Query: 431 -RNGXPI---DYSGGRQADDIISWLKKKTWPPAVEV--TSAEQAKELIDAHN 568 G + DY+G R + ++ P V++ + A+ K + DA N Sbjct: 114 SSKGSSLSSTDYNGDRSYKSLQKFVSDSI-PSKVKILTSEAKTQKFIQDAQN 164 >SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosaccharomyces pombe|chr 2|||Manual Length = 290 Score = 58.4 bits (135), Expect = 7e-10 Identities = 26/68 (38%), Positives = 40/68 (58%) Frame = +2 Query: 260 YAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG 439 YA WCG CK+++P +++ A+K A + AKV+ +++ +A GV+ PT FF NG Sbjct: 27 YADWCGPCKAISPLFSQLASKYASPK--FVFAKVNVDEQRQIASGLGVKAMPTFVFFENG 84 Query: 440 XPIDYSGG 463 ID G Sbjct: 85 KQIDMLTG 92 >SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccharomyces pombe|chr 2|||Manual Length = 121 Score = 52.4 bits (120), Expect = 5e-08 Identities = 29/81 (35%), Positives = 38/81 (46%) Frame = +2 Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436 FYA WCG CK L P KL+E+ V+A + D+A+ GV PT+ FR Sbjct: 42 FYADWCGPCKYLKP----FLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRK 97 Query: 437 GXPIDYSGGRQADDIISWLKK 499 G +D G + S L K Sbjct: 98 GQELDRIVGADVKTLSSLLAK 118 >SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 103 Score = 46.4 bits (105), Expect = 3e-06 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +2 Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436 F+A WCG CK++AP++ + + S KVD Q ++A GV P+ ++N Sbjct: 25 FFATWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLYKN 80 Query: 437 GXPID 451 G I+ Sbjct: 81 GEKIE 85 >SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces pombe|chr 2|||Manual Length = 726 Score = 41.9 bits (94), Expect = 7e-05 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = +2 Query: 239 GVHFS*FYAPWCGHCKSLAPEYAKAATKLAE--EESPIKLAKVDATQEQDLAESYGVRGY 412 G F +Y P CG CK L P + K E E S +VD ++E L+ +R Sbjct: 43 GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKE--LSSCANIRAV 100 Query: 413 PTLKFFRNGXPID 451 PTL ++NG ++ Sbjct: 101 PTLYLYQNGEIVE 113 Score = 34.3 bits (75), Expect = 0.014 Identities = 15/81 (18%), Positives = 38/81 (46%) Frame = +2 Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436 FY+ C C ++ + A ++ + +A ++ + + Y ++ +PT FF+ Sbjct: 305 FYSSECDDCDDVSTAWYAMANRM---RGKLNVAHINCAVSKRACKQYSIQYFPTFLFFKE 361 Query: 437 GXPIDYSGGRQADDIISWLKK 499 ++Y G D++S+ ++ Sbjct: 362 EAFVEYVGLPNEGDLVSFAEE 382 >SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces pombe|chr 1|||Manual Length = 632 Score = 35.9 bits (79), Expect = 0.005 Identities = 15/87 (17%), Positives = 43/87 (49%) Frame = +2 Query: 278 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGXPIDYS 457 HC+ A ++ + +K+A+V+ +E+++ + ++ +PT + F+ I Y+ Sbjct: 208 HCEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYN 267 Query: 458 GGRQADDIISWLKKKTWPPAVEVTSAE 538 G + ++S+ + A+++ + Sbjct: 268 GPLKYQQLLSYSNQVASYQAIKIEEGD 294 Score = 27.1 bits (57), Expect = 2.1 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Frame = +2 Query: 383 LAESYGVRGYPTLKFFRNGXPIDYSG--GRQADD---IISWLKKKTWPPAVEVT 529 LA YG + P++ RNG PI Y R+ D I W+ + P E+T Sbjct: 343 LANKYGAQSQPSIIAVRNGMPIVYQAITPREFRDYKRITEWINIVSSPFITELT 396 >SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr 2|||Manual Length = 244 Score = 34.3 bits (75), Expect = 0.014 Identities = 20/98 (20%), Positives = 39/98 (39%) Frame = +2 Query: 257 FYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 436 FYAPW CK + + + A++ K++A + D+AES+ V P Sbjct: 27 FYAPWAAPCKQMNQVF----DQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPLFVLIHG 82 Query: 437 GXPIDYSGGRQADDIISWLKKKTWPPAVEVTSAEQAKE 550 + G + + + + P +++S + E Sbjct: 83 AKVLARISGANPQKLKAAIDEYIQPLISQISSTNASVE 120 >SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 318 Score = 28.7 bits (61), Expect = 0.69 Identities = 27/86 (31%), Positives = 39/86 (45%) Frame = +2 Query: 278 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGXPIDYS 457 +C L P +AA L + +SP L VDA + L S+GVR + G + Sbjct: 183 YCAYLVPNEHEAAILLNQADSPATLENVDAYASKLL--SFGVRKAVIITLGSQGAYYKSA 240 Query: 458 GGRQADDIISWLKKKTWPPAVEVTSA 535 G A ++S K K AV+ T+A Sbjct: 241 NGESA--LVSACKVK----AVDTTAA 260 >SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 3699 Score = 26.2 bits (55), Expect = 3.7 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -2 Query: 369 VASTFASLIGDSSSASFVAALAYSGARDLQW 277 V++ F SL+G S FVA + R L+W Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069 >SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 747 Score = 25.8 bits (54), Expect = 4.8 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -3 Query: 125 NTHCDIIGTFLL 90 NTHCDI+ +FLL Sbjct: 275 NTHCDIVTSFLL 286 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,310,764 Number of Sequences: 5004 Number of extensions: 42603 Number of successful extensions: 120 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 110 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 262236260 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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