BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0823 (601 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.3 DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 2.3 AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 4.0 AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 4.0 AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 22 4.0 U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 9.2 AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 9.2 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 23.8 bits (49), Expect = 1.3 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -1 Query: 139 AVKIKTRIAILSAPFC*PTQKTELCKMPKSATSFPLPNLTW 17 +V++ +IA F T K ++ K+P A P P +TW Sbjct: 1272 SVRVPAKIASFDDKFT-ATYKEDV-KLPCLAVGVPAPEVTW 1310 Score = 21.4 bits (43), Expect = 7.0 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = -1 Query: 49 ATSFPLPNLTWPRA 8 A FP P +TW +A Sbjct: 702 ADGFPKPQVTWKKA 715 >DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. Length = 552 Score = 23.0 bits (47), Expect = 2.3 Identities = 14/51 (27%), Positives = 23/51 (45%) Frame = -1 Query: 517 SRGPSLLLQPTDDVISLTTT*IVDRTAIPEEFESRVSSYTVALGEILFLSC 365 ++G L P + LTT ++ + IP+E S YT + +I C Sbjct: 270 AKGGKLACPPAIFIFDLTTDTLIRKYIIPKEQVKEDSLYTNIVVDIRNEDC 320 >AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 22.2 bits (45), Expect = 4.0 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -2 Query: 552 SSLACSADVTSTAGGQVFF 496 S+L C A + T GG FF Sbjct: 255 STLHCWATIYKTEGGNAFF 273 >AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 22.2 bits (45), Expect = 4.0 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -2 Query: 552 SSLACSADVTSTAGGQVFF 496 S+L C A + T GG FF Sbjct: 255 STLHCWATIYKTEGGNAFF 273 >AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. Length = 122 Score = 22.2 bits (45), Expect = 4.0 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -1 Query: 49 ATSFPLPNLTW 17 AT FP P +TW Sbjct: 46 ATGFPRPEITW 56 >U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin protein. Length = 377 Score = 21.0 bits (42), Expect = 9.2 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -2 Query: 567 LWASISSLACSADVTSTA 514 L+A SLAC+A+ +S A Sbjct: 342 LFAKFPSLACAAEPSSDA 359 >AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II protein. Length = 190 Score = 21.0 bits (42), Expect = 9.2 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -2 Query: 129 LKHALRYYRHLFASLLRRRNSVKCRK 52 LKH R AS++ R+ +V C K Sbjct: 165 LKHPWICQRERVASVVHRQETVDCLK 190 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 150,761 Number of Sequences: 438 Number of extensions: 2690 Number of successful extensions: 8 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17604432 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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