Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0822
(341 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 141 1e-34
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 3e-33
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 2e-32
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 2e-32
SB_56| Best HMM Match : Actin (HMM E-Value=0) 132 5e-32
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 6e-30
SB_54| Best HMM Match : Actin (HMM E-Value=0) 52 2e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 3e-07
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 50 4e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 49 9e-07
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 6e-06
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.14
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.14
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 0.43
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 0.75
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 29 0.99
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 1.3
SB_51287| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 2.3
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 2.3
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 2.3
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.0
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 3.0
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 27 4.0
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 27 4.0
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_54780| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_24618| Best HMM Match : 7tm_1 (HMM E-Value=0.017) 27 5.3
SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011) 27 5.3
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 27 5.3
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 27 5.3
SB_44729| Best HMM Match : SET (HMM E-Value=0) 26 7.0
SB_42387| Best HMM Match : CH (HMM E-Value=2.7) 26 7.0
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 26 7.0
SB_5283| Best HMM Match : Ank (HMM E-Value=3.1e-09) 26 7.0
SB_10531| Best HMM Match : SET (HMM E-Value=0) 26 7.0
SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 141 bits (342), Expect = 1e-34
Identities = 69/95 (72%), Positives = 71/95 (74%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDDDVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 137 bits (331), Expect = 3e-33
Identities = 66/95 (69%), Positives = 70/95 (73%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
M DDD+AALV+DNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 134 bits (324), Expect = 2e-32
Identities = 66/95 (69%), Positives = 70/95 (73%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
M DD++AALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 134 bits (324), Expect = 2e-32
Identities = 66/93 (70%), Positives = 69/93 (74%)
Frame = +2
Query: 62 DDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQSK 241
+DDVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 242 RGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
RGIL + HHTFYN+L
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 94
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 132 bits (320), Expect = 5e-32
Identities = 65/93 (69%), Positives = 69/93 (74%)
Frame = +2
Query: 62 DDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQSK 241
+D+VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 242 RGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
RGIL + HHTFYN+L
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 94
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 126 bits (303), Expect = 6e-30
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +2
Query: 62 DDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQSK 241
DDDVAALV+DNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 242 RGIL 253
RGIL
Sbjct: 62 RGIL 65
Score = 46.8 bits (106), Expect = 5e-06
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 256 LKYPIEHGIITNWDDMEKI 312
LKYPIEHGI+TNWDDMEKI
Sbjct: 67 LKYPIEHGIVTNWDDMEKI 85
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 51.6 bits (118), Expect = 2e-07
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 23 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPR 175
AS T+ F+ V +V+DNGSG CKAG + ++PR VFP+IVG PR
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPR 2128
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 3e-07
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -2
Query: 178 VARATXDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 62
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 50.4 bits (115), Expect = 4e-07
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +2
Query: 80 LVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQ 181
LV+D GS M K GFAG DAP+ VFP IVG PR Q
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 49.2 bits (112), Expect = 9e-07
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = +2
Query: 17 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVG 196
IP + + ++ FK+ A+V+DNG G+ K GFAG PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 197 --MGQKD-SYVGXEAQSKRGIL 253
+ KD G A +K G++
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVM 763
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 46.4 bits (105), Expect = 6e-06
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +2
Query: 74 AALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXP--RXQGVMVGMGQKDSYVGXEAQSKRG 247
+ +V DNG+G K G+AG + P +FPS+VG P R + + KD VG EA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 248 IL 253
+L
Sbjct: 67 ML 68
Score = 36.3 bits (80), Expect = 0.007
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 238 QERYP-HLKYPIEHGIITNWDDMEKIW 315
Q RY + YP+++GI+ NWDDM+ +W
Sbjct: 63 QLRYMLEVNYPMDNGIVRNWDDMKHVW 89
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 51 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 155
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 31.9 bits (69), Expect = 0.14
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 259 KYPIEHGIITNWDDMEKIW 315
K+PI H I+ +WD ME+ W
Sbjct: 299 KWPIRHAIVEDWDLMERFW 317
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 0.43
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 51 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 155
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 0.75
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 42 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 155
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 29.1 bits (62), Expect = 0.99
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 LP*SQYQRPQHKHTQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 155
LP + P T S C +L+R T+ APA P SPAT P R
Sbjct: 397 LPADRRSEPLSAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPIR 448
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 36 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSXVALAT 179
K T ++ ATT + +T PA P +P TT P ++ P+ T
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTT 110
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +3
Query: 36 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWARKTP 215
K T ++ ATT + +T PA P P TT P ++ P+ T A TP
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP-----ATTTP 187
Query: 216 TWVTRP 233
T TRP
Sbjct: 188 T--TRP 191
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 42 TQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSXVALAT 179
T ++ ATT + +T PA P P TT P ++ P+ T
Sbjct: 51 TTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTT 96
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 36 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSXVALAT 179
K T ++ ATT +T PA P P TT P ++ P+ T
Sbjct: 77 KPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTT 124
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 42 TQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSXVALAT 179
T ++ ATT + +T PA P P TT P ++ P+ T
Sbjct: 93 TTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTT 138
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 36 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSXVALAT 179
K T ++ ATT + +T P P P TT P ++ P+ T
Sbjct: 105 KPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTT 152
>SB_51287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +3
Query: 135 RPAPSSRPSXVALATRA*WSVWARKTPTWVTRPRAREVSSSEVPHRARY 281
RP + +P L T W+ R TW T R + ++ HR +
Sbjct: 219 RPLDTKQPGHRPLDTEQTWTTTTRHRTTWTTTTRHQTTWTTTTRHRTTW 267
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 51 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 155
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 87 STMAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWARKTPTWVTRP 233
S P+ R TT+P P +PS V + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 SRCATTMLLR-L*STMAPACARPVSPAT 131
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 SRCATTMLLR-L*STMAPACARPVSPAT 131
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 SRCATTMLLR-L*STMAPACARPVSPAT 131
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 153 GKTARGASXPAKPALHMPEP 94
G T R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 153 GKTARGASXPAKPALHMPEP 94
G T R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 270 DGVLQMRIPLLLWASXPT*ESFWPIPTITPWXRGXPT 160
DGV+ +++ LLL +S P S PI TP +G T
Sbjct: 274 DGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 51 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 155
S C T+++R T+ APA P SPAT P R
Sbjct: 51 SSCLATLVVRPLETIPAPAPTTPTSPATPASGPPIR 86
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 SRCATTMLLR-L*STMAPACARPVSPAT 131
S C T L+R L +T APA P SPAT
Sbjct: 523 SSCLATFLVRTLETTPAPAPTTPTSPAT 550
>SB_54780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 49 VQDVRRRCCCACSRQW 96
V+D+ CCAC R+W
Sbjct: 108 VKDILSSVCCACPRRW 123
>SB_24618| Best HMM Match : 7tm_1 (HMM E-Value=0.017)
Length = 192
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 201 ARKTPTWVTRPRAREVSSS 257
AR TP WV RP + SSS
Sbjct: 173 ARSTPQWVIRPDINQYSSS 191
>SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011)
Length = 211
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 51 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 155
S C T+L+R L + APA P SPAT A R
Sbjct: 148 SSCLATLLVRPLETAPAPAPTTPTSPATPASAAPIR 183
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 75 LRL*STMAPACARPVSPATTRPAP 146
L+L ST+ P+ P++PA P P
Sbjct: 185 LQLLSTLIPSTTAPINPAAINPTP 208
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 71 VAALVVDNGSGMCKAGFAGXDAPRAV 148
+A LV+D G+ K GFA APR++
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI 258
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 208 RLLRGXRGPEQERYPHLKY--PIEHGIITNWDDMEKIW 315
+L G + E + Y L Y P + G + NWD ++IW
Sbjct: 271 KLFIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIW 308
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 27 PQHKHTQSSRCATTMLLRL*STMAPAC 107
PQ+KH ++++C T + L + P C
Sbjct: 729 PQYKHIKTNKCTTAQRIILDPSEMPVC 755
>SB_42387| Best HMM Match : CH (HMM E-Value=2.7)
Length = 703
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 63 TTMLLR-L*STMAPACARPVSPATTRPAPSSR 155
TT+L+R L +T APA P SP T P R
Sbjct: 185 TTLLVRPLETTPAPAPTTPTSPVTPASGPPIR 216
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 153 GKTARGASXPAKPALHMPEP 94
G T R PAKP+L++P P
Sbjct: 540 GNTNRRTRIPAKPSLNLPSP 559
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 26.2 bits (55), Expect = 7.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 43 HKVQDVRRRCCCACSR 90
H+ D R CCC C R
Sbjct: 1438 HQFDDAIRECCCLCCR 1453
>SB_5283| Best HMM Match : Ank (HMM E-Value=3.1e-09)
Length = 481
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 285 DDTVLDGVLQMRIPLLLWAS 226
DD V D VL+ R PL+ WA+
Sbjct: 61 DDDVPDPVLENRFPLIHWAA 80
>SB_10531| Best HMM Match : SET (HMM E-Value=0)
Length = 287
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 27 PQHKHTQSSRCATTMLLRL*STMAPAC 107
PQ+KH ++++C T + L + P C
Sbjct: 96 PQYKHIKTNKCTTAQRIILDPSEMPVC 122
>SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 99 PACARPVSPATTRPAPSSRPSXVALATR 182
P A P+ A+ RP PS+ P+ +A R
Sbjct: 262 PVQAIPLDRASPRPTPSNSPAPPGMANR 289
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,982,804
Number of Sequences: 59808
Number of extensions: 227509
Number of successful extensions: 769
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 498218920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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