Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0822
(341 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 141 1e-34
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 140 3e-34
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 140 3e-34
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 140 3e-34
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 140 3e-34
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 140 3e-34
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 140 3e-34
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 140 3e-34
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 132 8e-32
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 132 8e-32
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 130 2e-31
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 130 3e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 130 3e-31
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 101 2e-22
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 60 5e-10
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 56 9e-09
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 47 4e-06
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 36 0.006
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 33 0.071
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.16
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 31 0.29
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 30 0.50
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 30 0.50
Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 29 0.87
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 0.87
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 0.87
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 0.87
AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 29 0.87
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 29 1.2
AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical ... 28 1.5
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 27 2.7
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 27 3.5
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 27 3.5
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 26 6.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 26 6.1
U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead transc... 26 8.1
U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead transc... 26 8.1
U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw (imit... 26 8.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 141 bits (342), Expect = 1e-34
Identities = 69/95 (72%), Positives = 71/95 (74%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDDDVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 140 bits (338), Expect = 3e-34
Identities = 68/95 (71%), Positives = 71/95 (74%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDD+VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 140 bits (338), Expect = 3e-34
Identities = 68/95 (71%), Positives = 71/95 (74%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDD+VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 140 bits (338), Expect = 3e-34
Identities = 68/95 (71%), Positives = 71/95 (74%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDD+VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 140 bits (338), Expect = 3e-34
Identities = 68/95 (71%), Positives = 71/95 (74%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDD+VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 140 bits (338), Expect = 3e-34
Identities = 67/95 (70%), Positives = 71/95 (74%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDDDVAAL++DNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 140 bits (338), Expect = 3e-34
Identities = 68/95 (71%), Positives = 71/95 (74%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDD+VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 140 bits (338), Expect = 3e-34
Identities = 68/95 (71%), Positives = 71/95 (74%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDD+VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
SKRGIL + HHTFYN+L
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 132 bits (318), Expect = 8e-32
Identities = 62/66 (93%), Positives = 62/66 (93%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDDDVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGIL 253
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 46.8 bits (106), Expect = 4e-06
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 256 LKYPIEHGIITNWDDMEKI 312
LKYPIEHGI+TNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 132 bits (318), Expect = 8e-32
Identities = 62/66 (93%), Positives = 62/66 (93%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDDDVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGIL 253
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 41.1 bits (92), Expect = 2e-04
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 256 LKYPIEHGIITNWDDM 303
LKYPIEHGI+TNWDDM
Sbjct: 68 LKYPIEHGIVTNWDDM 83
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 130 bits (315), Expect = 2e-31
Identities = 63/93 (67%), Positives = 69/93 (74%)
Frame = +2
Query: 62 DDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQSK 241
++++AALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 242 RGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
RGIL + HHTFYN+L
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 94
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 130 bits (314), Expect = 3e-31
Identities = 61/66 (92%), Positives = 62/66 (93%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDD+VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGIL 253
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 46.8 bits (106), Expect = 4e-06
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 256 LKYPIEHGIITNWDDMEKI 312
LKYPIEHGI+TNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 130 bits (314), Expect = 3e-31
Identities = 61/66 (92%), Positives = 62/66 (93%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQ 235
MCDD+VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 236 SKRGIL 253
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 46.8 bits (106), Expect = 4e-06
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 256 LKYPIEHGIITNWDDMEKI 312
LKYPIEHGI+TNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 101 bits (241), Expect = 2e-22
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +2
Query: 110 KAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEAQSKRGILIXXXXXXXXXXX 289
+AGFAG DAPRAVFPSIVG PR QGVMVGMGQKDSYVG EAQSKRGIL
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 290 XGMTWRRSGHHTFYNDL 340
+ HHTFYN+L
Sbjct: 65 NWDDMEKIWHHTFYNEL 81
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 59.7 bits (138), Expect = 5e-10
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Frame = +2
Query: 62 DDDVAA---LVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVMVGMGQKDSYVGXEA 232
D DV A +V+DNGSG+ KAGFAG P+ F + VG P+ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 233 QSKRGI 250
+S RG+
Sbjct: 62 ESNRGL 67
Score = 43.2 bits (97), Expect = 5e-05
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1
Query: 256 LKYPIEHGIITNWDDMEKIW 315
++YP+EHGI+ NW DMEKIW
Sbjct: 70 IEYPMEHGIVNNWSDMEKIW 89
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 55.6 bits (128), Expect = 9e-09
Identities = 28/51 (54%), Positives = 30/51 (58%)
Frame = +2
Query: 188 MVGMGQKDSYVGXEAQSKRGILIXXXXXXXXXXXXGMTWRRSGHHTFYNDL 340
MVGMGQKDSYVG EAQSKRGIL + HHTFYN+L
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 51
Score = 51.2 bits (117), Expect = 2e-07
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 256 LKYPIEHGIITNWDDMEKIW 315
LKYPIEHGI+TNWDDMEKIW
Sbjct: 24 LKYPIEHGIVTNWDDMEKIW 43
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 46.8 bits (106), Expect = 4e-06
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 LVVDNGSGMCKAGFAGXDAPRAVFPSIVGXPRXQGVM-VG-MGQKDSYVGXEAQSKRGIL 253
+VVDNG+G K G+AG + P +FPS+VG P + VG + KD VG E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Score = 35.9 bits (79), Expect = 0.008
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 184 RDGRYGPERLLRGXRGPEQERYPHLKYPIEHGIITNWDDMEKIW 315
R G + L+ G + + + YP+++GI+ NWDDM +W
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVW 89
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 36.3 bits (80), Expect = 0.006
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 256 LKYPIEHGIITNWDDMEKIW 315
+KYPI HGI+ +WD ME+ W
Sbjct: 81 VKYPIRHGIVEDWDLMERYW 100
Score = 34.7 bits (76), Expect = 0.018
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 56 MCDDDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIV 163
M + A V+DNG+G K G+AG P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 32.7 bits (71), Expect = 0.071
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 65 DDVAALVVDNGSGMCKAGFAGXDAPRAVFPSIV 163
D+V+ LV D GS + GFAG + P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 87 STMAPACARPVSPATTRPAPSSRP 158
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 78 RL*STMAPACARPVSPATTRPAPSSRPSXVALATRA 185
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 29.9 bits (64), Expect = 0.50
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 265 PIEHGIITNWDDMEKIW 315
PIE G + NWD ++IW
Sbjct: 62 PIERGYVVNWDTQQQIW 78
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 29.9 bits (64), Expect = 0.50
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 265 PIEHGIITNWDDMEKIW 315
PIE G + NWD ++IW
Sbjct: 62 PIERGYVVNWDTQQQIW 78
>Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 29.1 bits (62), Expect = 0.87
Identities = 29/100 (29%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Frame = +3
Query: 48 SSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWARKTPTWVT 227
++R TT LR S TT PS+ + +T S + TW
Sbjct: 109 TTREQTTTTLRTTSASTTLSTTQPQTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTWTY 168
Query: 228 RPRAREVSSSEVPHRARY-----HHQLG*HGEDLGTTPST 332
R V P+R RY HHQ H TTPST
Sbjct: 169 TTRYPSVHD---PNRHRYGQDRIHHQHHHHHHHTTTTPST 205
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 29.1 bits (62), Expect = 0.87
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 87 STMAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWARKTPTWVTRPRAREVSSSEVP 266
ST +PA PV P P P P + + AR P RP+ + + E P
Sbjct: 958 STRSPALPPPVPPREAPPIPKRNPPPLGAPPKV--PEGARAPPPLPPRPKVKTTAVDETP 1015
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 29.1 bits (62), Expect = 0.87
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 87 STMAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWARKTPTWVTRPRAREVSSSEVP 266
ST +PA PV P P P P + + AR P RP+ + + E P
Sbjct: 958 STRSPALPPPVPPREAPPIPKRNPPPLGAPPKV--PEGARAPPPLPPRPKVKTTAVDETP 1015
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 29.1 bits (62), Expect = 0.87
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 87 STMAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWARKTPTWVTRPRAREVSSSEVP 266
ST +PA PV P P P P + + AR P RP+ + + E P
Sbjct: 958 STRSPALPPPVPPREAPPIPKRNPPPLGAPPKV--PEGARAPPPLPPRPKVKTTAVDETP 1015
>AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 29.1 bits (62), Expect = 0.87
Identities = 29/100 (29%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Frame = +3
Query: 48 SSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWARKTPTWVT 227
++R TT LR S TT PS+ + +T S + TW
Sbjct: 109 TTREQTTTTLRTTSASTTLSTTQPQTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTWTY 168
Query: 228 RPRAREVSSSEVPHRARY-----HHQLG*HGEDLGTTPST 332
R V P+R RY HHQ H TTPST
Sbjct: 169 TTRYPSVHD---PNRHRYGQDRIHHQHHHHHHHTTTTPST 205
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 87 STMAPACARPVSPATTRPAPSSRPSXVALATRA 185
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical
protein Y55F3C.7a protein.
Length = 500
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 114 PVSPATTRPAPSSRPSXVALATRA*WSVWARKTPTWVTRPRAREVSSSEVPH 269
P++ A+ P+SR S + R+ ++ R +TRP AR +S+ + H
Sbjct: 429 PITVASEYGVPASRNSDASSEGRSSNEIYRRPNQIALTRPEARHSNSTFMTH 480
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -3
Query: 201 PIPTITPWXRGXPTMDGKTARGASXPAKPALHMPEPL 91
P T TP RG P + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 33 HKHTQSSRCATTMLLRL*ST---MAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWA 203
HK R TT + R+ ++ M P+ P + TT AP++ + + ++ +S
Sbjct: 103 HKLLLKRRQWTTKIGRILASTTPMTPSTVVPTTTTTTTQAPTTTTKKMPKSLKSIYSTIV 162
Query: 204 RKTPTWVTRPRAREVSSSEVPHR 272
KT T P ++++ R
Sbjct: 163 AKTTTTTEEPTKAPATTTQATSR 185
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 33 HKHTQSSRCATTMLLRL*ST---MAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWA 203
HK R TT + R+ ++ M P+ P + TT AP++ + + ++ +S
Sbjct: 103 HKLLLKRRQWTTKIGRILASTTPMTPSTVVPTTTTTTTQAPTTTTKKMPKSLKSIYSTIV 162
Query: 204 RKTPTWVTRPRAREVSSSEVPHR 272
KT T P ++++ R
Sbjct: 163 AKTTTTTEEPTKAPATTTQATSR 185
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 33 HKHTQSSRCATTMLLRL*ST---MAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWA 203
HK R TT + R+ ++ M P+ P + TT AP++ + + ++ +S
Sbjct: 103 HKLLLKRRQWTTKIGRILASTTPMTPSTVVPTTTTTTTQAPTTTTKKMPKSLKSIYSTIV 162
Query: 204 RKTPTWVTRPRAREVSSSEVPHR 272
KT T P ++++ R
Sbjct: 163 AKTTTTTEEPTKAPATTTQATSR 185
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 33 HKHTQSSRCATTMLLRL*ST---MAPACARPVSPATTRPAPSSRPSXVALATRA*WSVWA 203
HK R TT + R+ ++ M P+ P + TT AP++ + + ++ +S
Sbjct: 103 HKLLLKRRQWTTKIGRILASTTPMTPSTVVPTTTTTTTQAPTTTTKKMPKSLKSIYSTIV 162
Query: 204 RKTPTWVTRPRAREVSSSEVPHR 272
KT T P ++++ R
Sbjct: 163 AKTTTTTEEPTKAPATTTQATSR 185
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 47 KFKMCDDDVAALVVDNGSGMCKAGFAGXDAPRAV 148
+F + +D V G +C +GF G D P V
Sbjct: 349 EFSLKGEDYVLKVSQGGKTICLSGFMGIDLPERV 382
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 110 KAGFAGXDAPRAVFPSIVGXPRXQG 184
KA + G D P+A F I+G +G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform b protein.
Length = 592
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -2
Query: 316 PRSSPCHPSW**YRARWGTSDEDTSLALGLVTHV 215
P S+P H W W + D+ + L+TH+
Sbjct: 132 PMSAPQHALWQHGMCAWPSCDQPCDSVMALITHL 165
>U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform a protein.
Length = 778
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -2
Query: 316 PRSSPCHPSW**YRARWGTSDEDTSLALGLVTHV 215
P S+P H W W + D+ + L+TH+
Sbjct: 318 PMSAPQHALWQHGMCAWPSCDQPCDSVMALITHL 351
>U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw
(imitation swi) homologprotein 1 protein.
Length = 1009
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 327 KVWCPDLLHVIPVGDDTVLDGVLQ 256
K WCP + V+ +GD+ + VL+
Sbjct: 201 KKWCPSINAVVLIGDEAARNQVLR 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,340,346
Number of Sequences: 27780
Number of extensions: 163216
Number of successful extensions: 623
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -