Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0821
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    27   0.63 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   5.8  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   5.8  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 26.6 bits (56), Expect = 0.63
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 326 ENRFLL*HFSVNAKLYLIN-LWLCLVVPSFYLKLRN*KHVGH 204
           ENR L     V   L +++ +++CL +PS+ +++R     GH
Sbjct: 310 ENRMLHSQMKVTKMLLIVSSVFVCLNLPSYVMRVRAFVETGH 351


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 281  YLINLWLCLVVPSFYL 234
            +LI LW C+  P F+L
Sbjct: 1045 FLIALWSCVSTPFFFL 1060


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 502 WSDHSECIRKTLVLIAPR 449
           W D  E IRK L+LI  R
Sbjct: 322 WPDFEEPIRKRLILIIAR 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,313
Number of Sequences: 2352
Number of extensions: 9131
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)