SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0821
         (609 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457385-1|CAG33666.1|   93|Homo sapiens HIG1 protein.                 35   0.19 
BC070277-1|AAH70277.1|   93|Homo sapiens HIG1 domain family, mem...    35   0.19 
BC009594-1|AAH09594.1|   93|Homo sapiens HIG1 domain family, mem...    35   0.19 
BC009583-1|AAH09583.1|   93|Homo sapiens HIG1 domain family, mem...    35   0.19 
BC000601-1|AAH00601.1|   93|Homo sapiens HIG1 domain family, mem...    35   0.19 
AF145385-1|AAD33954.1|   93|Homo sapiens hypoxia-inducbile gene ...    35   0.19 
BC128392-1|AAI28393.1|  782|Homo sapiens zinc finger protein 786...    29   9.7  
BC109245-1|AAI09246.1|  753|Homo sapiens ZNF786 protein protein.       29   9.7  

>CR457385-1|CAG33666.1|   93|Homo sapiens HIG1 protein.
          Length = 93

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 333 HEESQTEKLARKSKXSPFMVIGITGLXXXXXXXXXXXXXXXXMSTSVFLMHSE*SLQG 506
           +EE Q  KL RK+K +PF+ +GI G                    S+ L+H   + QG
Sbjct: 12  YEEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69


>BC070277-1|AAH70277.1|   93|Homo sapiens HIG1 domain family, member
           1A protein.
          Length = 93

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 333 HEESQTEKLARKSKXSPFMVIGITGLXXXXXXXXXXXXXXXXMSTSVFLMHSE*SLQG 506
           +EE Q  KL RK+K +PF+ +GI G                    S+ L+H   + QG
Sbjct: 12  YEEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69


>BC009594-1|AAH09594.1|   93|Homo sapiens HIG1 domain family, member
           1A protein.
          Length = 93

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 333 HEESQTEKLARKSKXSPFMVIGITGLXXXXXXXXXXXXXXXXMSTSVFLMHSE*SLQG 506
           +EE Q  KL RK+K +PF+ +GI G                    S+ L+H   + QG
Sbjct: 12  YEEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69


>BC009583-1|AAH09583.1|   93|Homo sapiens HIG1 domain family, member
           1A protein.
          Length = 93

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 333 HEESQTEKLARKSKXSPFMVIGITGLXXXXXXXXXXXXXXXXMSTSVFLMHSE*SLQG 506
           +EE Q  KL RK+K +PF+ +GI G                    S+ L+H   + QG
Sbjct: 12  YEEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69


>BC000601-1|AAH00601.1|   93|Homo sapiens HIG1 domain family, member
           1A protein.
          Length = 93

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 333 HEESQTEKLARKSKXSPFMVIGITGLXXXXXXXXXXXXXXXXMSTSVFLMHSE*SLQG 506
           +EE Q  KL RK+K +PF+ +GI G                    S+ L+H   + QG
Sbjct: 12  YEEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69


>AF145385-1|AAD33954.1|   93|Homo sapiens hypoxia-inducbile gene 1
           protein.
          Length = 93

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 333 HEESQTEKLARKSKXSPFMVIGITGLXXXXXXXXXXXXXXXXMSTSVFLMHSE*SLQG 506
           +EE Q  KL RK+K +PF+ +GI G                    S+ L+H   + QG
Sbjct: 12  YEEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69


>BC128392-1|AAI28393.1|  782|Homo sapiens zinc finger protein 786
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 9.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 481 CIQSDRSRXLVGALTCGHDVHSLQKPLSTSSXGMGX*RXGKL 606
           C++ D+   L G L      HS ++P S    G G  R  KL
Sbjct: 539 CLKCDKRFRLKGILKAHQHTHSKERPFSCGECGKGFTRQSKL 580


>BC109245-1|AAI09246.1|  753|Homo sapiens ZNF786 protein protein.
          Length = 753

 Score = 29.5 bits (63), Expect = 9.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 481 CIQSDRSRXLVGALTCGHDVHSLQKPLSTSSXGMGX*RXGKL 606
           C++ D+   L G L      HS ++P S    G G  R  KL
Sbjct: 510 CLKCDKRFRLKGILKAHQHTHSKERPFSCGECGKGFTRQSKL 551


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,815,871
Number of Sequences: 237096
Number of extensions: 1208091
Number of successful extensions: 1731
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1731
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -