Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0819
(499 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 25 0.38
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 24 0.66
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 24 0.87
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 1.2
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 1.2
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 1.2
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 23 2.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 4.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 4.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 4.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 4.7
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 25.0 bits (52), Expect = 0.38
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 284 RGDVRTDGAGAHLHD 328
RG R DGAG LHD
Sbjct: 291 RGAARADGAGGPLHD 305
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 24.2 bits (50), Expect = 0.66
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Frame = +3
Query: 318 IFMISVFGV-----KNNGNIVFVIMLTLLQXLCGMCFGFVI 425
IF++ +FG +NN ++V+V++L +L+ L M V+
Sbjct: 249 IFLLLIFGSGSATPENNVSVVYVLILYILESLLYMVTKLVV 289
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 23.8 bits (49), Expect = 0.87
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 282 FVVMCGQTALVLIFMISVFGVKNNGNIVFVIM-LTLLQXLCGMCFGFVISAACELERNAV 458
F+++ V FMI G+ ++G ++ + +L + FG++IS A+
Sbjct: 502 FIIIPVTLTSVCYFMI---GLNSHGFRFYIACGIMILVANVAISFGYLISCVSRSVSMAL 558
Query: 459 PAGPGFVLP 485
GP V+P
Sbjct: 559 SIGPPLVIP 567
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 290 DVRTDGAGAHLHDIGVRRQE 349
D RT +G HL ++G+R ++
Sbjct: 158 DSRTSPSGQHLQELGLRLED 177
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 290 DVRTDGAGAHLHDIGVRRQE 349
D RT +G HL ++G+R ++
Sbjct: 158 DSRTSPSGQHLQELGLRLED 177
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 290 DVRTDGAGAHLHDIGVRRQE 349
D RT +G HL ++G+R ++
Sbjct: 158 DSRTSPSGQHLQELGLRLED 177
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 22.6 bits (46), Expect = 2.0
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 282 FVVMCGQTALVLIFMISVFGVKNNGNIVFVIM-LTLLQXLCGMCFGFVISAACELERNAV 458
F+++ V FMI G+ + G ++ + +L + FG++IS A+
Sbjct: 502 FIIIPVILTSVCYFMI---GLNSQGFRFYIACGIMILVANVAISFGYLISCVSRSVSMAL 558
Query: 459 PAGPGFVLP 485
GP V+P
Sbjct: 559 SIGPPLVIP 567
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3
Query: 377 HDNEDDVPIILDAEHRYHEDEHQRRLSAHHHELV 276
H+N++++ L + R ED+ RR++ + +V
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVV 604
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3
Query: 377 HDNEDDVPIILDAEHRYHEDEHQRRLSAHHHELV 276
H+N++++ L + R ED+ RR++ + +V
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVV 604
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3
Query: 377 HDNEDDVPIILDAEHRYHEDEHQRRLSAHHHELV 276
H+N++++ L + R ED+ RR++ + +V
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVV 604
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3
Query: 377 HDNEDDVPIILDAEHRYHEDEHQRRLSAHHHELV 276
H+N++++ L + R ED+ RR++ + +V
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVV 604
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,313
Number of Sequences: 336
Number of extensions: 2139
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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