BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0819 (499 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U28738-12|AAK68400.1| 189|Caenorhabditis elegans Sr protein (sp... 32 0.27 Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.61 Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.61 Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 27 5.7 Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 5.7 AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 27 5.7 AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 27 5.7 AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 5.7 AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical ... 27 7.6 Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 27 10.0 AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 27 10.0 AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 27 10.0 AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 27 10.0 >U28738-12|AAK68400.1| 189|Caenorhabditis elegans Sr protein (splicing factor) protein5, isoform c protein. Length = 189 Score = 31.9 bits (69), Expect = 0.27 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 413 EAHAAQTLQQSQHDNEDDVPIILDAEHRYHEDE 315 E HAA T+ H DDVP +LD H H+++ Sbjct: 28 ENHAAMTVMDRDH--HDDVPALLDVVHVLHQED 58 >Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical protein ZC101.1 protein. Length = 905 Score = 30.7 bits (66), Expect = 0.61 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -3 Query: 422 HEPEAHAAQTLQQSQHDNEDDVPIILDAEHRYHEDEHQRR 303 H + H AQ Q SQ +E+ + EHR E+EH RR Sbjct: 691 HHSQQHPAQPAQPSQDHHEEHRRRL--EEHRRREEEHHRR 728 >Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical protein ZC101.1 protein. Length = 905 Score = 30.7 bits (66), Expect = 0.61 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -3 Query: 422 HEPEAHAAQTLQQSQHDNEDDVPIILDAEHRYHEDEHQRR 303 H + H AQ Q SQ +E+ + EHR E+EH RR Sbjct: 691 HHSQQHPAQPAQPSQDHHEEHRRRL--EEHRRREEEHHRR 728 >Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical protein F48F5.1 protein. Length = 1291 Score = 27.5 bits (58), Expect = 5.7 Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Frame = -3 Query: 398 QTLQQSQHDNED-DVPIILDAEHRYHEDEHQRRLSAHHHELVXDLXEQDXPGDTPATQNR 222 Q +Q++ D ++ ++ ++ E R E E+++R++A + L + E+ QN+ Sbjct: 781 QRKKQAKIDRDNKEIRDEIEMEARQAE-ENEQRIAAEKNALEAKIKEKSNMRKVVDEQNQ 839 Query: 221 SRXPSIRSTINADDVRATARK 159 +++ + AD ++ ARK Sbjct: 840 REKDELQAKLRADQEKSEARK 860 >Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical protein K10D3.2 protein. Length = 665 Score = 27.5 bits (58), Expect = 5.7 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -1 Query: 349 FLTPNTDIMKMSTSAVCPHITTNWXTTCXNR 257 F NT ++ STS P +TN + C +R Sbjct: 285 FFKSNTQLLTSSTSKTAPQTSTNIVSNCIDR 315 >AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B protein. Length = 4450 Score = 27.5 bits (58), Expect = 5.7 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 425 IGRLRARAERSSSWPW 472 +GRLRA +SSWPW Sbjct: 3893 VGRLRASPYITSSWPW 3908 >AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein 805, isoform b protein. Length = 4450 Score = 27.5 bits (58), Expect = 5.7 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 425 IGRLRARAERSSSWPW 472 +GRLRA +SSWPW Sbjct: 3893 VGRLRASPYITSSWPW 3908 >AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. Length = 665 Score = 27.5 bits (58), Expect = 5.7 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -1 Query: 349 FLTPNTDIMKMSTSAVCPHITTNWXTTCXNR 257 F NT ++ STS P +TN + C +R Sbjct: 285 FFKSNTQLLTSSTSKTAPQTSTNIVSNCIDR 315 >AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical protein Y40C5A.1 protein. Length = 242 Score = 27.1 bits (57), Expect = 7.6 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 5/50 (10%) Frame = -3 Query: 383 SQHDNEDDVPII-LDAEHRYHE----DEHQRRLSAHHHELVXDLXEQDXP 249 S++ +E +VPII ++H H+ ++++R HHH+ + + D P Sbjct: 116 SRNYHEVNVPIIRTPSQHSIHQSVRFNDNKRHHHHHHHDSIRNFVHHDTP 165 >Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein K07G5.3 protein. Length = 1202 Score = 26.6 bits (56), Expect = 10.0 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = -2 Query: 492 QRGVERTQGQLELRSALARR 433 Q+ VERT+G ++L LARR Sbjct: 151 QKAVERTRGNVQLNRRLARR 170 >AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical protein Y73B6BL.5c protein. Length = 391 Score = 26.6 bits (56), Expect = 10.0 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -3 Query: 419 EPEAHAAQTLQQSQHDNEDDVPIILDAEHRYHEDEHQRRLSAHHHE 282 EPE +T + D + ++ HR ED+ RR S+ HH+ Sbjct: 201 EPEKKKPRTSENDDKDKKHHGSSSSNS-HRRREDDKDRRQSSDHHK 245 >AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical protein Y73B6BL.5b protein. Length = 526 Score = 26.6 bits (56), Expect = 10.0 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -3 Query: 419 EPEAHAAQTLQQSQHDNEDDVPIILDAEHRYHEDEHQRRLSAHHHE 282 EPE +T + D + ++ HR ED+ RR S+ HH+ Sbjct: 336 EPEKKKPRTSENDDKDKKHHGSSSSNS-HRRREDDKDRRQSSDHHK 380 >AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical protein Y73B6BL.5a protein. Length = 571 Score = 26.6 bits (56), Expect = 10.0 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -3 Query: 419 EPEAHAAQTLQQSQHDNEDDVPIILDAEHRYHEDEHQRRLSAHHHE 282 EPE +T + D + ++ HR ED+ RR S+ HH+ Sbjct: 381 EPEKKKPRTSENDDKDKKHHGSSSSNS-HRRREDDKDRRQSSDHHK 425 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,063,952 Number of Sequences: 27780 Number of extensions: 226736 Number of successful extensions: 774 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 721 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 771 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 945973702 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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