Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0818
(587 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 306 7e-84
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 301 2e-82
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 297 3e-81
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 179 1e-45
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 1e-45
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 149 1e-36
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 122 2e-28
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 120 7e-28
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 2e-27
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 119 2e-27
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 118 4e-27
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 92 4e-19
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 91 8e-19
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 75 6e-14
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 69 3e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 64 6e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 3e-06
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.008
SB_29113| Best HMM Match : RVT_1 (HMM E-Value=0.0066) 30 1.6
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.1
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 3.7
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 28 4.9
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0) 28 6.5
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_38710| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-09) 27 8.6
SB_4588| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29) 27 8.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 306 bits (752), Expect = 7e-84
Identities = 144/167 (86%), Positives = 149/167 (89%)
Frame = +2
Query: 53 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 232
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 233 QVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
+ LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 330
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
DVVRKE+ESCDCLQGFQLTHSL G LLISKIREE PDRIM
Sbjct: 331 DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 377
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 301 bits (740), Expect = 2e-82
Identities = 142/164 (86%), Positives = 146/164 (89%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+ESCDCLQGFQLTHSL G LLISKIREE PDRIM
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 297 bits (730), Expect = 3e-81
Identities = 139/164 (84%), Positives = 146/164 (89%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+ESCDC+QGFQLTHSL G LLISKIREE PDRIM
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 179 bits (436), Expect = 1e-45
Identities = 86/100 (86%), Positives = 88/100 (88%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 433
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+
Sbjct: 10 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 69
Query: 434 ESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
ESCDC+QGFQLTHSL LLI KIREE PDRIM
Sbjct: 70 ESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIM 109
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 179 bits (436), Expect = 1e-45
Identities = 81/92 (88%), Positives = 84/92 (91%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVF 337
LVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 149 bits (362), Expect = 1e-36
Identities = 68/110 (61%), Positives = 84/110 (76%)
Frame = +2
Query: 224 SGGQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 403
+GG+ LVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 404 SVLDVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
++ DV+RKE+E+CDC+QG QL +L G L++SKIREE PDRI+
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRIL 120
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 122 bits (294), Expect = 2e-28
Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VL
Sbjct: 61 -HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVL 119
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D +RK ++ C LQGF + HS + LL+ ++
Sbjct: 120 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERL 157
Score = 122 bits (294), Expect = 2e-28
Identities = 62/160 (38%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
Frame = +2
Query: 56 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 229
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 230 GQVRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 406
G+ PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 492 GK-HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDL 550
Query: 407 VLDVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
VLD +RK ++ C LQGF + HS + LL+ ++
Sbjct: 551 VLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERL 590
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 120 bits (290), Expect = 7e-28
Identities = 61/158 (38%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VL
Sbjct: 646 -HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVL 704
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D +RK ++ C LQGF + HS + LL+ ++
Sbjct: 705 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERL 742
Score = 119 bits (287), Expect = 2e-27
Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 3/161 (1%)
Frame = +2
Query: 53 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEAS 226
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 227 GGQVRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 403
G+ PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 122 AGK-HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVD 180
Query: 404 SVLDVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
VLD +RK ++ C LQGF + HS + LL+ ++
Sbjct: 181 LVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERL 221
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 65 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQV 238
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK- 572
Query: 239 RAPRHL-VDLEPGTMDSV 289
PR + VDLEP + +
Sbjct: 573 HVPRAVFVDLEPTVRECI 590
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 119 bits (287), Expect = 2e-27
Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
Frame = +2
Query: 56 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 229
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 230 GQVRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 406
G+ PR + VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+
Sbjct: 477 GK-HVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDN 535
Query: 407 VLDVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
VLD +RK ++ C LQGF + HS + LL+ ++
Sbjct: 536 VLDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERL 575
Score = 100 bits (240), Expect = 8e-22
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Frame = +2
Query: 107 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRHLV-DLEPGT 277
+G WE+ EHGI P G D + + N +++E G+ PR + DLEP
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK-HVPRAVFCDLEPTV 59
Query: 278 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 457
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++ C LQG
Sbjct: 60 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQG 119
Query: 458 FQLTHSLXLRHRVRYGQLLISKI 526
F + HS + LL+ ++
Sbjct: 120 FLIFHSFGGGTGSGFSSLLMERL 142
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 119 bits (286), Expect = 2e-27
Identities = 58/140 (41%), Positives = 83/140 (59%), Gaps = 3/140 (2%)
Frame = +2
Query: 65 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 238
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK- 59
Query: 239 RAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD 119
Query: 416 VVRKESESCDCLQGFQLTHS 475
+RK ++ C LQGF + HS
Sbjct: 120 RIRKLADQCTGLQGFLIFHS 139
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 118 bits (284), Expect = 4e-27
Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Frame = +2
Query: 56 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 229
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 230 GQVRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 406
G+ PR + DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 863 GK-HVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDL 921
Query: 407 VLDVVRKESESCDCLQGFQLTHS 475
VLD +RK ++ C LQGF + HS
Sbjct: 922 VLDRIRKLADQCTGLQGFLIFHS 944
Score = 115 bits (277), Expect = 3e-26
Identities = 58/140 (41%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Frame = +2
Query: 65 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 238
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E G+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGK- 431
Query: 239 RAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 432 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLD 491
Query: 416 VVRKESESCDCLQGFQLTHS 475
+RK ++ C LQGF + HS
Sbjct: 492 RLRKLADGCTGLQGFLIFHS 511
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 118 bits (284), Expect = 4e-27
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 236 VRAPRHLV-DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VL
Sbjct: 61 -HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVL 119
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D +RK ++ C LQGF + HS + LL+ ++
Sbjct: 120 DRLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERL 157
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 118 bits (284), Expect = 4e-27
Identities = 60/158 (37%), Positives = 89/158 (56%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 61 -HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVL 119
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D RK ++ C LQGF + HS + LL+ ++
Sbjct: 120 DRCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERL 157
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 91.9 bits (218), Expect = 4e-19
Identities = 42/71 (59%), Positives = 53/71 (74%)
Frame = +2
Query: 341 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLIS 520
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ+ HSL G LL+S
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 521 KIREEXPDRIM 553
KIREE PDR++
Sbjct: 62 KIREEYPDRLV 72
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 90.6 bits (215), Expect = 8e-19
Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MRE + + GQ G QIG WE+ EHGI P G D + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP + P+ + G+ A NN+A+GHYT G + VD VL
Sbjct: 61 -HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVL 109
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D +RK ++ C LQGF + HS + LL+ ++
Sbjct: 110 DRLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERL 147
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = +2
Query: 194 ERINVYYNEASGGQVRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 370
+ N ++ E G+ PR + VDLEP +D +R+G + Q+F P+ + G+ A NN+A+
Sbjct: 12 DSFNTFFAETGAGK-HVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYAR 70
Query: 371 GHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
GHYT G E +D LD +RK ++ C LQGF + HS + LL+ ++
Sbjct: 71 GHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERL 122
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 85.0 bits (201), Expect = 4e-17
Identities = 37/87 (42%), Positives = 57/87 (65%)
Frame = +2
Query: 215 NEASGGQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 394
+EA+ G+ LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 395 LVDSVLDVVRKESESCDCLQGFQLTHS 475
+V+ V+D +RK ++ C LQGF + HS
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHS 1051
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/82 (41%), Positives = 51/82 (62%)
Frame = +2
Query: 281 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 460
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 461 QLTHSLXLRHRVRYGQLLISKI 526
+ HS + LL+ ++
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERL 94
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQL 466
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 467 THSLXLRHRVRYGQLLISKI 526
HS + LL+ ++
Sbjct: 63 FHSFGGGTGSGFSSLLMERL 82
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQL 466
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 467 THSLXLRHRVRYGQLLISKI 526
HS + LL+ ++
Sbjct: 63 FHSFGGGTGSGFSSLLMERL 82
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 64.5 bits (150), Expect = 6e-11
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Frame = +2
Query: 71 IVHLQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 232
IV LQ GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 233 QVRAPRHLVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 403
+ A +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 404 SVLDVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPD 544
VLD+V++E E CD L GF SL G + + +R+ P+
Sbjct: 123 KVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPN 169
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 427
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGQ 235
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GG+
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVR 292
PR + VDLEP + ++
Sbjct: 61 -HVPRAVFVDLEPSVVGRMK 79
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 427
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 419 VRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIMXXI 562
+RKE+E CD +QGFQL HSL G L++ ++EE PDRI+ +
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSV 48
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 46.4 bits (105), Expect = 2e-05
Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 5/159 (3%)
Frame = +2
Query: 80 LQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPRHLV 259
L GQCGNQIG + ++ + P H D L+ ++ S +V A
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKLRCVCVD------SESKVIASNRRS 57
Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDVVR 424
D G GQ R N + G+ G GNN+A G++ G L+ +D +R
Sbjct: 58 D-----------GVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMR 105
Query: 425 KESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXP 541
KE E CD G + HSL G L+ + + P
Sbjct: 106 KEVERCDSFAGTIVMHSLTGGTGSGLGARLVETLSDAYP 144
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 119 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 220
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 50 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 217
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 218 EASGGQ 235
E + G+
Sbjct: 250 ETASGK 255
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 188 QLERINVYYNEASGGQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 364
+L+ I V ++ ++A L+D+E G ++++ GP +F + SG GNNW
Sbjct: 57 RLKDIPVGNSKGKIKSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_29113| Best HMM Match : RVT_1 (HMM E-Value=0.0066)
Length = 444
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 287 QSPWCRAPSRRDG-AGHVLARRRLHCSIH*CAPTASQSPHGRHRWGR 150
Q+P ++ G H + +RR S+H C T + P GR+RW R
Sbjct: 205 QAPRAEKQGQKGGFPSHDVVKRRPVPSLHACRSTL-EDPRGRYRWTR 250
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 432 QNLAIAYRASNLHIPXXCGTGSGMGNSSSQR 524
+ + + + A+N H+P TGSG+ +SS R
Sbjct: 1095 RGIGVNFLAANTHVPSFANTGSGIYSSSGAR 1125
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 6.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 351 APDCPKTKLSGRKICPKGPERTESMVPGSKST 256
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 176 DSDLQLERINVYYNEASGGQVRAPRHLVDLEPGTMDSV 289
D+D ++ + VYYN +S G++ + LVD P + V
Sbjct: 7 DNDYYMQCLTVYYNGSSAGEILC-KSLVDKIPDALQRV 43
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 217 IVVYIDALQLQVRVPM-VGTGGVDAVLVRDDLPELSSN 107
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
>SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0)
Length = 575
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 197 APTASQSPHG--RHRWGRCRARQR*SPRT*LQSGYHIGRPVDERFPSFCISY 48
A AS S +G HRW R ARQR T ++G GR +D F F + +
Sbjct: 468 AQGASPSAYGASHHRWPRELARQRMGLLTSAETGSIPGRDMDGIFLFFGLEF 519
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 413 RGPSQRAQHPLCSVPWPSCCQRRTVRR 333
+GPS L S P+ + C RRT+RR
Sbjct: 1183 QGPSTPEAMTLPSPPYAAACPRRTIRR 1209
>SB_38710| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-09)
Length = 435
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 164 HRWGRCRARQR*SPRT*LQSGYHIGRPVD 78
HRW ARQR P T ++G GR +D
Sbjct: 396 HRWPSVLARQRMRPLTSAETGSTPGRDID 424
>SB_4588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 729
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 350 RRTVRRRSCPDGRSVRKVQSGQSPWCRAPSRR--DGAGHVLARRR 222
RR RRR R R+ + + R+ RR DG+G++ +RRR
Sbjct: 88 RREARRREREARRKQREQEEEEPAPARSSRRRDQDGSGYISSRRR 132
>SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29)
Length = 651
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = -1
Query: 425 CGLHRGPSQRAQHPLCSVPWPSCCQRRTVRRRSCPDGRSVRKVQ-SGQSPWC--RAPS 261
C HR P Q+ ++ + + + RRT++ CP G SG C R PS
Sbjct: 264 CPGHRYPRQQYRNTVVTATYSDISTRRTLQEFGCPKGEQGASCDLSGHQTACLSRLPS 321
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,296,250
Number of Sequences: 59808
Number of extensions: 448927
Number of successful extensions: 1346
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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