Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0818
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 299 1e-81
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 289 1e-78
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 283 9e-77
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 283 9e-77
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 281 3e-76
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 280 6e-76
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 192 2e-49
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 192 2e-49
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 125 2e-29
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 125 3e-29
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 125 3e-29
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 124 4e-29
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 123 1e-28
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 123 1e-28
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 118 2e-27
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 118 2e-27
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 117 7e-27
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 117 7e-27
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 117 7e-27
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 115 2e-26
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 115 3e-26
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 103 1e-22
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 103 1e-22
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 98 4e-21
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 27 9.9
AC024845-7|AAF60849.2| 422|Caenorhabditis elegans Hypothetical ... 27 9.9
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 27 9.9
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 27 9.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 299 bits (733), Expect = 1e-81
Identities = 139/164 (84%), Positives = 148/164 (90%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREIVH+QAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGG+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+ESCDCLQGFQ+THSL G LLISKIREE PDRIM
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 289 bits (708), Expect = 1e-78
Identities = 135/164 (82%), Positives = 143/164 (87%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+E CDCLQGFQLTHSL G LLISKIREE PDRIM
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 283 bits (693), Expect = 9e-77
Identities = 133/164 (81%), Positives = 142/164 (86%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA +
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+ES DCLQGFQLTHSL G LLISKIREE PDRIM
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 283 bits (693), Expect = 9e-77
Identities = 133/164 (81%), Positives = 142/164 (86%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA +
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+ES DCLQGFQLTHSL G LLISKIREE PDRIM
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 281 bits (689), Expect = 3e-76
Identities = 130/164 (79%), Positives = 142/164 (86%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ G+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+E CDCLQGFQLTHSL G LLISKIREE PDRIM
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIM 164
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 280 bits (686), Expect = 6e-76
Identities = 129/164 (78%), Positives = 142/164 (86%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ G+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+E CDCLQGFQLTHSL G LLISKIREE PDRIM
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 192 bits (467), Expect = 2e-49
Identities = 88/164 (53%), Positives = 118/164 (71%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G +
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
LVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
R+E+E+ D L+GFQL HSL G LLISK+REE D+ +
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTL 164
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 192 bits (467), Expect = 2e-49
Identities = 88/164 (53%), Positives = 118/164 (71%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G +
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
LVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
R+E+E+ D L+GFQL HSL G LLISK+REE D+ +
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTL 164
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 125 bits (302), Expect = 2e-29
Identities = 61/159 (38%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Frame = +2
Query: 65 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGQVR 241
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+ G+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGK-H 64
Query: 242 APRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 418
PR + VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 419 VRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREE 535
+RK++E+C+ LQGF + HS + LL+ ++ E
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVE 163
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 125 bits (301), Expect = 3e-29
Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 1/139 (0%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRY- 59
Query: 242 APRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 418
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 419 VRKESESCDCLQGFQLTHS 475
+R+ +++C LQGF + HS
Sbjct: 120 IRRLADNCSGLQGFFVFHS 138
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 125 bits (301), Expect = 3e-29
Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 1/139 (0%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRY- 59
Query: 242 APRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 418
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 419 VRKESESCDCLQGFQLTHS 475
+R+ +++C LQGF + HS
Sbjct: 120 IRRLADNCSGLQGFFVFHS 138
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 124 bits (300), Expect = 4e-29
Identities = 62/141 (43%), Positives = 86/141 (60%), Gaps = 3/141 (2%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGQ 235
MREIV + GQ G QIG WE+ EHGI P G D+ +E N +++E G+
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+
Sbjct: 61 -HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVM 119
Query: 413 DVVRKESESCDCLQGFQLTHS 475
D VR+ +E C LQGF + HS
Sbjct: 120 DRVRRLTERCQSLQGFLIFHS 140
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 123 bits (296), Expect = 1e-28
Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRY- 59
Query: 242 APRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 418
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 419 VRKESESCDCLQGFQLTHS 475
+R+ +++C LQGF + HS
Sbjct: 120 IRRLADNCSGLQGFFVFHS 138
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 123 bits (296), Expect = 1e-28
Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRY- 59
Query: 242 APRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 418
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 419 VRKESESCDCLQGFQLTHS 475
+R+ +++C LQGF + HS
Sbjct: 120 IRRLADNCSGLQGFFVFHS 138
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 120 bits (288), Expect = 1e-27
Identities = 60/141 (42%), Positives = 88/141 (62%), Gaps = 4/141 (2%)
Frame = +2
Query: 65 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGQ 235
RE++ + GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GG+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR L VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+
Sbjct: 67 -HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVM 125
Query: 413 DVVRKESESCDCLQGFQLTHS 475
D V++ +E+C+ LQGF + HS
Sbjct: 126 DRVKRLAENCNGLQGFVIFHS 146
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 118 bits (285), Expect = 2e-27
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRY- 59
Query: 242 APRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 418
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDR 119
Query: 419 VRKESESCDCLQGFQLTHS 475
+R+ +++C LQGF + HS
Sbjct: 120 IRRLADNCSGLQGFFVFHS 138
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 118 bits (285), Expect = 2e-27
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRY- 59
Query: 242 APRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 418
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDR 119
Query: 419 VRKESESCDCLQGFQLTHS 475
+R+ +++C LQGF + HS
Sbjct: 120 IRRLADNCSGLQGFFVFHS 138
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 117 bits (281), Expect = 7e-27
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 235
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 236 VRAPRH-LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR +VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D L
Sbjct: 61 -HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 413 DVVRKESESCDCLQGFQLTHS 475
D +R+ +++C LQGF + HS
Sbjct: 120 DRIRRLADNCTGLQGFLVFHS 140
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 117 bits (281), Expect = 7e-27
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 235
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 236 VRAPRH-LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR +VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D L
Sbjct: 61 -HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 413 DVVRKESESCDCLQGFQLTHS 475
D +R+ +++C LQGF + HS
Sbjct: 120 DRIRRLADNCTGLQGFLVFHS 140
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 117 bits (281), Expect = 7e-27
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 235
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 236 VRAPRH-LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR +VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D L
Sbjct: 61 -HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 413 DVVRKESESCDCLQGFQLTHS 475
D +R+ +++C LQGF + HS
Sbjct: 120 DRIRRLADNCTGLQGFLVFHS 140
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 115 bits (277), Expect = 2e-26
Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 3/142 (2%)
Frame = +2
Query: 59 KMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 232
+ RE++ + GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 233 QVRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 409
+ PR + VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 65 K-HVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 410 LDVVRKESESCDCLQGFQLTHS 475
+D VR+ E+C LQGF + HS
Sbjct: 124 MDRVRRLVENCRGLQGFLVFHS 145
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 115 bits (276), Expect = 3e-26
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 3/140 (2%)
Frame = +2
Query: 65 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQV 238
RE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR- 59
Query: 239 RAPRH-LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
PR +VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 60 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 119
Query: 416 VVRKESESCDCLQGFQLTHS 475
+R+ +++C LQGF + HS
Sbjct: 120 RIRRLADNCTGLQGFLVFHS 139
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 112 bits (270), Expect = 2e-25
Identities = 53/139 (38%), Positives = 85/139 (61%), Gaps = 1/139 (0%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MRE++ + GQ G QIG WE+ EHGI P G + D + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGR-H 58
Query: 242 APRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 418
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD
Sbjct: 59 VPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDR 118
Query: 419 VRKESESCDCLQGFQLTHS 475
+R+ + +C+ LQGF + HS
Sbjct: 119 IRRLANNCEGLQGFFVFHS 137
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 103 bits (246), Expect = 1e-22
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 4/165 (2%)
Frame = +2
Query: 71 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR 250
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y V PR
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQADDDHYV--PR 64
Query: 251 H-LVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 418
LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 419 VRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
+ +E+E+ + L G THS+ G LL+ ++RE P +++
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVI 168
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 103 bits (246), Expect = 1e-22
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 4/165 (2%)
Frame = +2
Query: 71 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR 250
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y V PR
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQADDDHYV--PR 64
Query: 251 H-LVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 418
LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 419 VRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
+ +E+E+ + L G THS+ G LL+ ++RE P +++
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVI 168
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 98.3 bits (234), Expect = 4e-21
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGQVRAPRHL-VDLEPGTMDSVRSGPFG 307
EHGI P G YH + D + E IN ++ E +GG+ PR L VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK-HVPRCLFVDLEPTVVDEVRTGTYR 62
Query: 308 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHS 475
+F P+ + G+ A N +A+G YT G E++D V+D V++ +E+C+ LQGF + HS
Sbjct: 63 SLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHS 118
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform II protein.
Length = 835
Score = 27.1 bits (57), Expect = 9.9
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 421 DYIEDRVNELSTLCVVSLGPVVASAGLSEDEVVR--TEDLSERSRADRVHGAGLQVDEMA 248
D + D N S V S + S S E + TEDLSERS ++ G V+E
Sbjct: 95 DSVFDEQNVASLEGVNSKNEISGSVSSSSFEELNAETEDLSERSEVEKDEDLGRVVEEHK 154
Query: 247 RGTYLP 230
+P
Sbjct: 155 EPAQVP 160
>AC024845-7|AAF60849.2| 422|Caenorhabditis elegans Hypothetical
protein Y65B4BL.1 protein.
Length = 422
Score = 27.1 bits (57), Expect = 9.9
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Frame = +2
Query: 179 SDLQLERINVYYNEASGGQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFG-----Q 343
SDLQ + ++ SG + R + + MD G FG D F FG
Sbjct: 72 SDLQPQTGASTFSIGSGSGNWSTRGVGGVNGDYMDKSGGGMFGNSRNNDRFAFGNNSSSS 131
Query: 344 SGAG----NNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ 454
S AG NN + G ++ L+ ++ V E + DC Q
Sbjct: 132 SSAGCFSSNNSSGGLFSSILILISIIIPSVYSEPKLPDCEQ 172
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform a protein.
Length = 786
Score = 27.1 bits (57), Expect = 9.9
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 421 DYIEDRVNELSTLCVVSLGPVVASAGLSEDEVVR--TEDLSERSRADRVHGAGLQVDEMA 248
D + D N S V S + S S E + TEDLSERS ++ G V+E
Sbjct: 46 DSVFDEQNVASLEGVNSKNEISGSVSSSSFEELNAETEDLSERSEVEKDEDLGRVVEEHK 105
Query: 247 RGTYLP 230
+P
Sbjct: 106 EPAQVP 111
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform b protein.
Length = 835
Score = 27.1 bits (57), Expect = 9.9
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 421 DYIEDRVNELSTLCVVSLGPVVASAGLSEDEVVR--TEDLSERSRADRVHGAGLQVDEMA 248
D + D N S V S + S S E + TEDLSERS ++ G V+E
Sbjct: 95 DSVFDEQNVASLEGVNSKNEISGSVSSSSFEELNAETEDLSERSEVEKDEDLGRVVEEHK 154
Query: 247 RGTYLP 230
+P
Sbjct: 155 EPAQVP 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,885,969
Number of Sequences: 27780
Number of extensions: 316268
Number of successful extensions: 951
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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