Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0818
(587 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 279 1e-75
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 276 9e-75
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 275 1e-74
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 275 1e-74
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 275 1e-74
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 273 6e-74
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 273 6e-74
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 272 2e-73
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 271 2e-73
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 122 2e-28
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 121 4e-28
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 121 4e-28
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 118 4e-27
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 118 4e-27
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 115 2e-26
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 115 2e-26
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 103 9e-23
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 103 1e-22
At5g04140.2 68418.m00402 glutamate synthase (GLU1) / ferredoxin-... 31 0.75
At5g04140.1 68418.m00401 glutamate synthase (GLU1) / ferredoxin-... 31 0.75
At2g41220.1 68415.m05090 glutamate synthase, chloroplast (GLU2) ... 30 1.00
At4g37190.1 68417.m05265 expressed protein 30 1.3
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.3
At3g62910.1 68416.m07067 peptide chain release factor, putative ... 29 1.7
At1g57700.1 68414.m06548 protein kinase family protein contains ... 28 5.3
At1g52080.1 68414.m05875 actin binding protein family contains P... 28 5.3
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 7.0
At2g46700.1 68415.m05827 calcium-dependent protein kinase, putat... 27 9.3
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 9.3
At2g21080.1 68415.m02502 expressed protein 27 9.3
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 279 bits (684), Expect = 1e-75
Identities = 128/165 (77%), Positives = 144/165 (87%), Gaps = 1/165 (0%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 238
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 239 RAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 418
L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 419 VRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
VRKE+E+CDCLQGFQ+ HSL G LLISKIREE PDR+M
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 165
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 276 bits (676), Expect = 9e-75
Identities = 128/165 (77%), Positives = 142/165 (86%), Gaps = 1/165 (0%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 238
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 239 RAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 418
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 419 VRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
VRKE+E+CDCLQGFQ+ HSL G LLISKIREE PDR+M
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 165
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 275 bits (675), Expect = 1e-74
Identities = 127/164 (77%), Positives = 140/164 (85%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+E+CDCLQGFQ+ HSL G LLISKIREE PDR+M
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 275 bits (675), Expect = 1e-74
Identities = 127/164 (77%), Positives = 140/164 (85%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+E+CDCLQGFQ+ HSL G LLISKIREE PDR+M
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 275 bits (675), Expect = 1e-74
Identities = 125/164 (76%), Positives = 142/164 (86%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+E+CDCLQGFQ+ HSL G LLISKIREE PDR+M
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 273 bits (669), Expect = 6e-74
Identities = 125/164 (76%), Positives = 140/164 (85%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+E+CDCLQGFQ+ HSL G LLISKIREE PDR+M
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 273 bits (669), Expect = 6e-74
Identities = 127/164 (77%), Positives = 140/164 (85%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+E+CDCLQGFQ+ HSL G LLISKIREE PDR+M
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 272 bits (666), Expect = 2e-73
Identities = 125/164 (76%), Positives = 141/164 (85%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+E+CDCLQGFQ+ HSL G LLISKIREE PDR+M
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 271 bits (665), Expect = 2e-73
Identities = 127/164 (77%), Positives = 140/164 (85%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 241
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 242 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 422 RKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKIREEXPDRIM 553
RKE+E+ DCLQGFQ+ HSL G LLISKIREE PDR+M
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 122 bits (294), Expect = 2e-28
Identities = 61/158 (38%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S GQ
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L
Sbjct: 61 -HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCL 119
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
+ +RK +++C LQGF + +++ G LL+ ++
Sbjct: 120 ERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 121 bits (291), Expect = 4e-28
Identities = 61/158 (38%), Positives = 94/158 (59%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCL 119
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D VRK +++C LQGF + +++ G LL+ ++
Sbjct: 120 DRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 121 bits (291), Expect = 4e-28
Identities = 61/158 (38%), Positives = 94/158 (59%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCL 119
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D VRK +++C LQGF + +++ G LL+ ++
Sbjct: 120 DRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 118 bits (283), Expect = 4e-27
Identities = 60/158 (37%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D +RK +++C LQGF + +++ G LL+ ++
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 118 bits (283), Expect = 4e-27
Identities = 60/158 (37%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D +RK +++C LQGF + +++ G LL+ ++
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 115 bits (277), Expect = 2e-26
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D +RK +++C LQGF + +++ G LL+ ++
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 115 bits (277), Expect = 2e-26
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 235
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 236 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 412
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 413 DVVRKESESCDCLQGFQLTHSLXLRHRVRYGQLLISKI 526
D +RK +++C LQGF + +++ G LL+ ++
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 103 bits (247), Expect = 9e-23
Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Frame = +2
Query: 65 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 244
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 245 PRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 418
L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 419 VRKESESCDCLQGFQLTHSL 478
+ +E++ D L+GF L HS+
Sbjct: 122 IDREADGSDSLEGFVLCHSI 141
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 103 bits (246), Expect = 1e-22
Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Frame = +2
Query: 65 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 244
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 245 PRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 418
L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 419 VRKESESCDCLQGFQLTHSL 478
+ +E++ D L+GF L HS+
Sbjct: 122 IDREADGSDSLEGFVLCHSI 141
>At5g04140.2 68418.m00402 glutamate synthase (GLU1) /
ferredoxin-dependent glutamate synthase (Fd-GOGAT 1)
identical to ferredoxin-dependent glutamate synthase
precursor [Arabidopsis thaliana] GI:3869251
Length = 1648
Score = 30.7 bits (66), Expect = 0.75
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 184 LAVGA-HQCILQ*SLRRASTCPAPSRRLGARHHGLCPLWTFRTDLPSGQLRLRTVRRWQ 357
LAVGA HQ ++Q LR +++ A + + + HH C L + L L T R+W+
Sbjct: 756 LAVGAVHQHLIQNGLRMSASIVADTAQCFSTHHFAC-LVGYGASAVCPYLALETCRQWR 813
>At5g04140.1 68418.m00401 glutamate synthase (GLU1) /
ferredoxin-dependent glutamate synthase (Fd-GOGAT 1)
identical to ferredoxin-dependent glutamate synthase
precursor [Arabidopsis thaliana] GI:3869251
Length = 1622
Score = 30.7 bits (66), Expect = 0.75
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 184 LAVGA-HQCILQ*SLRRASTCPAPSRRLGARHHGLCPLWTFRTDLPSGQLRLRTVRRWQ 357
LAVGA HQ ++Q LR +++ A + + + HH C L + L L T R+W+
Sbjct: 730 LAVGAVHQHLIQNGLRMSASIVADTAQCFSTHHFAC-LVGYGASAVCPYLALETCRQWR 787
>At2g41220.1 68415.m05090 glutamate synthase, chloroplast (GLU2) /
ferredoxin-dependent glutamate synthase (Fd-GOGAT 2)
identical to SP|Q9T0P4 Ferredoxin-dependent glutamate
synthase 2, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT
2) {Arabidopsis thaliana}
Length = 1629
Score = 30.3 bits (65), Expect = 1.00
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 184 LAVGA-HQCILQ*SLRRASTCPAPSRRLGARHHGLCPLWTFRTDLPSGQLRLRTVRRWQ 357
LAVGA HQ ++Q LR +++ A + + + HH C L + L L T R+W+
Sbjct: 732 LAVGAVHQHLIQNGLRMSASIIADTAQCFSTHHFAC-LIGYGASAICPHLALETCRQWR 789
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 62 MREIVHLQAGQCGNQIGAKFWEIISDEHGI 151
MREIV +Q G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 395 LVDSVLDVVRKESESCDCLQGFQLTHS 475
+++SV VVRKE+E+C+CLQ F ++ S
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVSGS 26
>At3g62910.1 68416.m07067 peptide chain release factor, putative
similar to peptide chain release factor 1 [Escherichia
coli] GI:147567; contains Pfam profiles PF00472:
Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain
Length = 422
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -1
Query: 419 LHRGP----SQRAQHPLCSVPWPSCCQRRTVRRRSCPDGRSVRKVQSGQSPW 276
LH P S+++ +C V WP RRT R + +RK++S + W
Sbjct: 17 LHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRKMESVEKTW 68
>At1g57700.1 68414.m06548 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 686
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 289 PLWTFRTDLPSGQLRLRTVRRWQQLGQGTLHR 384
P++T + P+G +LRT R + Q G G L R
Sbjct: 531 PIYTNGDNHPNGSSQLRTQRSYVQRGSGQLSR 562
>At1g52080.1 68414.m05875 actin binding protein family contains
Prosite PS00019: Actinin-type actin-binding domain
signature 1; similar to actin binding protein
(GI:28071265) [Arabidopsis thaliana]; similar to A-type
inclusion protein (ATI) (Swiss-Prot:P16602) [Cowpox
virus]
Length = 573
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 213 TMKPPAGKYVPRAISSTWSP 272
T +PPAGK V R +S+T SP
Sbjct: 372 TYQPPAGKTVARDLSTTLSP 391
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 68 EIVHLQAGQCGNQIGAKFWEIISD 139
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At2g46700.1 68415.m05827 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium/calmodulin-dependent
protein kinase homolog MCK1 [Zea mays]
gi|1839597|gb|AAB47181
Length = 595
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -1
Query: 374 VPWPSCCQ--RRTVRRRSCPDGRS-VRKVQSGQSPWCRAPSR 258
VPWPSC + V+R D R + VQ+ PW R SR
Sbjct: 369 VPWPSCSSEGKDFVKRLLNKDYRKRMSAVQALTHPWLRDDSR 410
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 83 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 175
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At2g21080.1 68415.m02502 expressed protein
Length = 414
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -3
Query: 342 CPKTKLSGRKICPKGPERTESMVPGSK--STRWRGARTCPPEA 220
C +LSG +C G R G +TRW A TC EA
Sbjct: 294 CSAVQLSGFFLCLLGAARITHRAQGVVCIATRWHMALTCASEA 336
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,228,770
Number of Sequences: 28952
Number of extensions: 299465
Number of successful extensions: 881
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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