BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0817 (645 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_01_0272 + 2016836-2017963 109 2e-24 08_02_1217 - 25347555-25347600,25348519-25348649,25348753-253491... 31 0.78 01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081... 29 4.2 01_06_1527 - 38006174-38006815,38006920-38007420 28 7.3 12_02_1238 - 27246769-27246948,27247030-27247104,27247848-272479... 27 9.7 >06_01_0272 + 2016836-2017963 Length = 375 Score = 109 bits (262), Expect = 2e-24 Identities = 65/149 (43%), Positives = 82/149 (55%) Frame = +3 Query: 3 ENFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVAT 182 ENFVTRKITR V +I +GL + LGNL + RDWG A DYVEAMW MLQQD+P D+ VAT Sbjct: 224 ENFVTRKITRAVGRIKVGLQTKVFLGNLSAARDWGFAGDYVEAMWRMLQQDKPGDYVVAT 283 Query: 183 GETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AI 362 E+H V F +F G W+ D Y P + Sbjct: 284 EESHTVEEFLQAAFGYAG--LNWK-------DHVVIDKKY--------FRPAEVDSLQGD 326 Query: 363 QAKAKQKLGWGPKVSFDQLVKDMVEADLD 449 KA+++LGW PKV F QLV+ MV+ D++ Sbjct: 327 ATKARKELGWKPKVGFQQLVEMMVDNDIE 355 Score = 33.5 bits (73), Expect = 0.15 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +2 Query: 305 VKVNPKYFRPNEVDLLLGDPSKGETEVRMGPQ 400 V ++ KYFRP EVD L GD +K E+ P+ Sbjct: 308 VVIDKKYFRPAEVDSLQGDATKARKELGWKPK 339 >08_02_1217 - 25347555-25347600,25348519-25348649,25348753-25349190, 25352581-25352674,25352794-25352891 Length = 268 Score = 31.1 bits (67), Expect = 0.78 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +1 Query: 448 IDEKDTRSVESIYLRKPLHYEISIYCGRATAIVXHLRQIRV 570 +DE D R ++YL+KPL++ + T + L Q++V Sbjct: 199 LDETDMRGEGTMYLQKPLYFRTEAWVVEMTTLQGQLWQVKV 239 >01_06_0556 + 30207124-30207581,30207692-30207901,30208016-30208100, 30208517-30208676,30208768-30208844,30208985-30209032, 30209504-30209594,30209703-30210004,30210214-30210495, 30210695-30211011,30211113-30211273,30211556-30211665, 30211752-30211902,30212438-30212578,30212688-30212857, 30213485-30213817,30213981-30214271,30214356-30214439, 30214620-30214753,30214946-30215173,30215273-30215444, 30215621-30215875,30215963-30216232 Length = 1509 Score = 28.7 bits (61), Expect = 4.2 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +2 Query: 329 RPNEVDLLLGDPSKGETEVRMGPQS*LRPTSQGYG 433 RP+ + LLLG PS G+T + + L PT + G Sbjct: 220 RPSRMTLLLGPPSSGKTTLLLALAGKLDPTLETSG 254 >01_06_1527 - 38006174-38006815,38006920-38007420 Length = 380 Score = 27.9 bits (59), Expect = 7.3 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 1/69 (1%) Frame = +3 Query: 150 QDEPXDFXVATGETHX-VRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSI 326 Q P + TG H V + K C GR P T P + + + L++ Sbjct: 207 QSFPVAYGYLTGSRHSFVEVYYHKGKTCRGRYSRRMEPDITLPQWRKGSQWFELRRDLAV 266 Query: 327 SAPTKWTYY 353 +A T YY Sbjct: 267 AALTDARYY 275 >12_02_1238 - 27246769-27246948,27247030-27247104,27247848-27247959, 27248213-27248295,27248544-27248791,27249448-27249533, 27250131-27250210,27250310-27250480,27250998-27251099, 27251591-27251743,27252459-27252575,27252715-27252804, 27253057-27253196,27253339-27253396,27253931-27254010, 27254215-27254349,27254482-27254646,27254982-27255021 Length = 704 Score = 27.5 bits (58), Expect = 9.7 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 Query: 478 ILRFWCLFHQSRSASTISLTSWSKLTLGPH 389 +L+F+ L QSR A +SL W + L H Sbjct: 572 LLKFFILLMQSRGAVLVSLLPWLQSLLSQH 601 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,262,315 Number of Sequences: 37544 Number of extensions: 285014 Number of successful extensions: 612 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 603 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 612 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1596695220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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