Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0817
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541947-1|CAG46745.1| 372|Homo sapiens GMDS protein. 153 4e-37
CR541929-1|CAG46727.1| 372|Homo sapiens GMDS protein. 153 4e-37
BC000117-1|AAH00117.1| 372|Homo sapiens GDP-mannose 4,6-dehydra... 153 4e-37
AL158139-1|CAI22880.1| 372|Homo sapiens GMDS protein. 153 4e-37
AL137179-1|CAI16872.1| 372|Homo sapiens GMDS protein. 153 4e-37
AL035693-1|CAB65990.2| 372|Homo sapiens GMDS protein. 153 4e-37
AL034344-1|CAI19400.1| 372|Homo sapiens GMDS protein. 153 4e-37
AL033517-1|CAI20018.1| 372|Homo sapiens GMDS protein. 153 4e-37
AF042377-1|AAC13553.1| 372|Homo sapiens GDP-mannose 4,6 dehydra... 153 4e-37
AF040260-1|AAC24501.1| 339|Homo sapiens GDP-D-mannose-4,6-dehyd... 153 4e-37
AL034344-2|CAI19401.1| 114|Homo sapiens GMDS protein. 87 5e-17
AL033517-2|CAI20019.1| 114|Homo sapiens GMDS protein. 87 5e-17
BC063111-1|AAH63111.1| 493|Homo sapiens GGT6 protein protein. 30 8.1
AK074646-1|BAC11110.1| 461|Homo sapiens protein ( Homo sapiens ... 30 8.1
>CR541947-1|CAG46745.1| 372|Homo sapiens GMDS protein.
Length = 372
Score = 153 bits (372), Expect = 4e-37
Identities = 75/148 (50%), Positives = 90/148 (60%)
Frame = +3
Query: 6 NFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVATG 185
NFVTRKI+R VAKI LG + LGNLD+KRDWGHAKDYVEAMW MLQ DEP DF +ATG
Sbjct: 217 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG 276
Query: 186 ETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AIQ 365
E H VR F KSF G+ W + L PT+ +
Sbjct: 277 EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 336
Query: 366 AKAKQKLGWGPKVSFDQLVKDMVEADLD 449
KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 337 TKAKQKLNWKPRVAFDELVREMVHADVE 364
>CR541929-1|CAG46727.1| 372|Homo sapiens GMDS protein.
Length = 372
Score = 153 bits (372), Expect = 4e-37
Identities = 75/148 (50%), Positives = 90/148 (60%)
Frame = +3
Query: 6 NFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVATG 185
NFVTRKI+R VAKI LG + LGNLD+KRDWGHAKDYVEAMW MLQ DEP DF +ATG
Sbjct: 217 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG 276
Query: 186 ETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AIQ 365
E H VR F KSF G+ W + L PT+ +
Sbjct: 277 EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 336
Query: 366 AKAKQKLGWGPKVSFDQLVKDMVEADLD 449
KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 337 TKAKQKLNWKPRVAFDELVREMVHADVE 364
>BC000117-1|AAH00117.1| 372|Homo sapiens GDP-mannose
4,6-dehydratase protein.
Length = 372
Score = 153 bits (372), Expect = 4e-37
Identities = 75/148 (50%), Positives = 90/148 (60%)
Frame = +3
Query: 6 NFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVATG 185
NFVTRKI+R VAKI LG + LGNLD+KRDWGHAKDYVEAMW MLQ DEP DF +ATG
Sbjct: 217 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG 276
Query: 186 ETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AIQ 365
E H VR F KSF G+ W + L PT+ +
Sbjct: 277 EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 336
Query: 366 AKAKQKLGWGPKVSFDQLVKDMVEADLD 449
KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 337 TKAKQKLNWKPRVAFDELVREMVHADVE 364
>AL158139-1|CAI22880.1| 372|Homo sapiens GMDS protein.
Length = 372
Score = 153 bits (372), Expect = 4e-37
Identities = 75/148 (50%), Positives = 90/148 (60%)
Frame = +3
Query: 6 NFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVATG 185
NFVTRKI+R VAKI LG + LGNLD+KRDWGHAKDYVEAMW MLQ DEP DF +ATG
Sbjct: 217 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG 276
Query: 186 ETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AIQ 365
E H VR F KSF G+ W + L PT+ +
Sbjct: 277 EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 336
Query: 366 AKAKQKLGWGPKVSFDQLVKDMVEADLD 449
KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 337 TKAKQKLNWKPRVAFDELVREMVHADVE 364
>AL137179-1|CAI16872.1| 372|Homo sapiens GMDS protein.
Length = 372
Score = 153 bits (372), Expect = 4e-37
Identities = 75/148 (50%), Positives = 90/148 (60%)
Frame = +3
Query: 6 NFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVATG 185
NFVTRKI+R VAKI LG + LGNLD+KRDWGHAKDYVEAMW MLQ DEP DF +ATG
Sbjct: 217 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG 276
Query: 186 ETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AIQ 365
E H VR F KSF G+ W + L PT+ +
Sbjct: 277 EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 336
Query: 366 AKAKQKLGWGPKVSFDQLVKDMVEADLD 449
KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 337 TKAKQKLNWKPRVAFDELVREMVHADVE 364
>AL035693-1|CAB65990.2| 372|Homo sapiens GMDS protein.
Length = 372
Score = 153 bits (372), Expect = 4e-37
Identities = 75/148 (50%), Positives = 90/148 (60%)
Frame = +3
Query: 6 NFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVATG 185
NFVTRKI+R VAKI LG + LGNLD+KRDWGHAKDYVEAMW MLQ DEP DF +ATG
Sbjct: 217 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG 276
Query: 186 ETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AIQ 365
E H VR F KSF G+ W + L PT+ +
Sbjct: 277 EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 336
Query: 366 AKAKQKLGWGPKVSFDQLVKDMVEADLD 449
KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 337 TKAKQKLNWKPRVAFDELVREMVHADVE 364
>AL034344-1|CAI19400.1| 372|Homo sapiens GMDS protein.
Length = 372
Score = 153 bits (372), Expect = 4e-37
Identities = 75/148 (50%), Positives = 90/148 (60%)
Frame = +3
Query: 6 NFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVATG 185
NFVTRKI+R VAKI LG + LGNLD+KRDWGHAKDYVEAMW MLQ DEP DF +ATG
Sbjct: 217 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG 276
Query: 186 ETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AIQ 365
E H VR F KSF G+ W + L PT+ +
Sbjct: 277 EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 336
Query: 366 AKAKQKLGWGPKVSFDQLVKDMVEADLD 449
KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 337 TKAKQKLNWKPRVAFDELVREMVHADVE 364
>AL033517-1|CAI20018.1| 372|Homo sapiens GMDS protein.
Length = 372
Score = 153 bits (372), Expect = 4e-37
Identities = 75/148 (50%), Positives = 90/148 (60%)
Frame = +3
Query: 6 NFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVATG 185
NFVTRKI+R VAKI LG + LGNLD+KRDWGHAKDYVEAMW MLQ DEP DF +ATG
Sbjct: 217 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG 276
Query: 186 ETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AIQ 365
E H VR F KSF G+ W + L PT+ +
Sbjct: 277 EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 336
Query: 366 AKAKQKLGWGPKVSFDQLVKDMVEADLD 449
KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 337 TKAKQKLNWKPRVAFDELVREMVHADVE 364
>AF042377-1|AAC13553.1| 372|Homo sapiens GDP-mannose 4,6
dehydratase protein.
Length = 372
Score = 153 bits (372), Expect = 4e-37
Identities = 75/148 (50%), Positives = 90/148 (60%)
Frame = +3
Query: 6 NFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVATG 185
NFVTRKI+R VAKI LG + LGNLD+KRDWGHAKDYVEAMW MLQ DEP DF +ATG
Sbjct: 217 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG 276
Query: 186 ETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AIQ 365
E H VR F KSF G+ W + L PT+ +
Sbjct: 277 EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 336
Query: 366 AKAKQKLGWGPKVSFDQLVKDMVEADLD 449
KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 337 TKAKQKLNWKPRVAFDELVREMVHADVE 364
>AF040260-1|AAC24501.1| 339|Homo sapiens
GDP-D-mannose-4,6-dehydratase protein.
Length = 339
Score = 153 bits (372), Expect = 4e-37
Identities = 75/148 (50%), Positives = 90/148 (60%)
Frame = +3
Query: 6 NFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVATG 185
NFVTRKI+R VAKI LG + LGNLD+KRDWGHAKDYVEAMW MLQ DEP DF +ATG
Sbjct: 184 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG 243
Query: 186 ETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AIQ 365
E H VR F KSF G+ W + L PT+ +
Sbjct: 244 EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 303
Query: 366 AKAKQKLGWGPKVSFDQLVKDMVEADLD 449
KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 304 TKAKQKLNWKPRVAFDELVREMVHADVE 331
>AL034344-2|CAI19401.1| 114|Homo sapiens GMDS protein.
Length = 114
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/106 (40%), Positives = 55/106 (51%)
Frame = +3
Query: 132 MWXMLQQDEPXDFXVATGETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSK 311
MW MLQ DEP DF +ATGE H VR F KSF G+ W +
Sbjct: 1 MWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVT 60
Query: 312 STLSISAPTKWTYY*AIQAKAKQKLGWGPKVSFDQLVKDMVEADLD 449
L PT+ + KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 61 VDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVE 106
>AL033517-2|CAI20019.1| 114|Homo sapiens GMDS protein.
Length = 114
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/106 (40%), Positives = 55/106 (51%)
Frame = +3
Query: 132 MWXMLQQDEPXDFXVATGETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSK 311
MW MLQ DEP DF +ATGE H VR F KSF G+ W +
Sbjct: 1 MWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVT 60
Query: 312 STLSISAPTKWTYY*AIQAKAKQKLGWGPKVSFDQLVKDMVEADLD 449
L PT+ + KAKQKL W P+V+FD+LV++MV AD++
Sbjct: 61 VDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVE 106
>BC063111-1|AAH63111.1| 493|Homo sapiens GGT6 protein protein.
Length = 493
Score = 29.9 bits (64), Expect = 8.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 469 FWCLFHQSRSASTISLTSWSKLTLGP 392
FW LFH S S ++ +LTS TL P
Sbjct: 150 FWGLFHDSSSGNSTALTSGPAQTLAP 175
>AK074646-1|BAC11110.1| 461|Homo sapiens protein ( Homo sapiens
cDNA FLJ90165 fis, clone MAMMA1000106. ).
Length = 461
Score = 29.9 bits (64), Expect = 8.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 469 FWCLFHQSRSASTISLTSWSKLTLGP 392
FW LFH S S ++ +LTS TL P
Sbjct: 118 FWGLFHDSSSGNSTALTSGPAQTLAP 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,930,034
Number of Sequences: 237096
Number of extensions: 1510222
Number of successful extensions: 2484
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2460
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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