BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0817 (645 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81553-5|CAB04494.1| 382|Caenorhabditis elegans Hypothetical pr... 125 2e-29 AM231685-1|CAJ77754.1| 375|Caenorhabditis elegans GDP-mannose 4... 125 2e-29 Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical p... 120 7e-28 Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical p... 120 7e-28 Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical p... 120 7e-28 Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical p... 120 7e-28 Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical pr... 120 7e-28 AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose 4... 120 7e-28 AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose 4... 120 7e-28 U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 27 8.6 >Z81553-5|CAB04494.1| 382|Caenorhabditis elegans Hypothetical protein F56H6.5 protein. Length = 382 Score = 125 bits (302), Expect = 2e-29 Identities = 65/148 (43%), Positives = 85/148 (57%) Frame = +3 Query: 3 ENFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVAT 182 E FVTRKITR VAKI+L ++ELGNL + RDWGHAK+YVEAMW +LQQD P DF +AT Sbjct: 227 ETFVTRKITRSVAKISLRQQEHIELGNLSALRDWGHAKEYVEAMWRILQQDTPDDFVIAT 286 Query: 183 GETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AI 362 G+ VR F +F G W + K + PT+ Sbjct: 287 GKQFSVREFCNLAFAEIGEQLVWEGEGVDEVGKNQD-GVVRVKVSPKYYRPTEVETLLGN 345 Query: 363 QAKAKQKLGWGPKVSFDQLVKDMVEADL 446 AKA++ LGW PK++ +LVK+MV +D+ Sbjct: 346 PAKARKTLGWEPKITVPELVKEMVASDI 373 >AM231685-1|CAJ77754.1| 375|Caenorhabditis elegans GDP-mannose 4,6-dehydratase protein. Length = 375 Score = 125 bits (302), Expect = 2e-29 Identities = 65/148 (43%), Positives = 85/148 (57%) Frame = +3 Query: 3 ENFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVAT 182 E FVTRKITR VAKI+L ++ELGNL + RDWGHAK+YVEAMW +LQQD P DF +AT Sbjct: 220 ETFVTRKITRSVAKISLRQQEHIELGNLSALRDWGHAKEYVEAMWRILQQDTPDDFVIAT 279 Query: 183 GETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AI 362 G+ VR F +F G W + K + PT+ Sbjct: 280 GKQFSVREFCNLAFAEIGEQLVWEGEGVDEVGKNQD-GVVRVKVSPKYYRPTEVETLLGN 338 Query: 363 QAKAKQKLGWGPKVSFDQLVKDMVEADL 446 AKA++ LGW PK++ +LVK+MV +D+ Sbjct: 339 PAKARKTLGWEPKITVPELVKEMVASDI 366 >Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical protein C53B4.7e protein. Length = 394 Score = 120 bits (290), Expect = 7e-28 Identities = 64/148 (43%), Positives = 82/148 (55%) Frame = +3 Query: 3 ENFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVAT 182 E FVTRKITR VAKI+LG +ELGNL + RDWGHA++YVEAMW +LQ D P DF +AT Sbjct: 239 ETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMWRILQHDSPDDFVIAT 298 Query: 183 GETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AI 362 G+ VR F +F G W + K + PT+ Sbjct: 299 GKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKD-GVIRVKVSPKYYRPTEVETLLGN 357 Query: 363 QAKAKQKLGWGPKVSFDQLVKDMVEADL 446 KAK+ LGW KV+ +LVK+MV +D+ Sbjct: 358 AEKAKKTLGWEAKVTVPELVKEMVASDI 385 >Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical protein C53B4.7d protein. Length = 382 Score = 120 bits (290), Expect = 7e-28 Identities = 64/148 (43%), Positives = 82/148 (55%) Frame = +3 Query: 3 ENFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVAT 182 E FVTRKITR VAKI+LG +ELGNL + RDWGHA++YVEAMW +LQ D P DF +AT Sbjct: 227 ETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMWRILQHDSPDDFVIAT 286 Query: 183 GETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AI 362 G+ VR F +F G W + K + PT+ Sbjct: 287 GKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKD-GVIRVKVSPKYYRPTEVETLLGN 345 Query: 363 QAKAKQKLGWGPKVSFDQLVKDMVEADL 446 KAK+ LGW KV+ +LVK+MV +D+ Sbjct: 346 AEKAKKTLGWEAKVTVPELVKEMVASDI 373 >Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical protein C53B4.7c protein. Length = 368 Score = 120 bits (290), Expect = 7e-28 Identities = 64/148 (43%), Positives = 82/148 (55%) Frame = +3 Query: 3 ENFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVAT 182 E FVTRKITR VAKI+LG +ELGNL + RDWGHA++YVEAMW +LQ D P DF +AT Sbjct: 213 ETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMWRILQHDSPDDFVIAT 272 Query: 183 GETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AI 362 G+ VR F +F G W + K + PT+ Sbjct: 273 GKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKD-GVIRVKVSPKYYRPTEVETLLGN 331 Query: 363 QAKAKQKLGWGPKVSFDQLVKDMVEADL 446 KAK+ LGW KV+ +LVK+MV +D+ Sbjct: 332 AEKAKKTLGWEAKVTVPELVKEMVASDI 359 >Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical protein C53B4.7b protein. Length = 399 Score = 120 bits (290), Expect = 7e-28 Identities = 64/148 (43%), Positives = 82/148 (55%) Frame = +3 Query: 3 ENFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVAT 182 E FVTRKITR VAKI+LG +ELGNL + RDWGHA++YVEAMW +LQ D P DF +AT Sbjct: 244 ETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMWRILQHDSPDDFVIAT 303 Query: 183 GETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AI 362 G+ VR F +F G W + K + PT+ Sbjct: 304 GKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKD-GVIRVKVSPKYYRPTEVETLLGN 362 Query: 363 QAKAKQKLGWGPKVSFDQLVKDMVEADL 446 KAK+ LGW KV+ +LVK+MV +D+ Sbjct: 363 AEKAKKTLGWEAKVTVPELVKEMVASDI 390 >Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical protein C53B4.7a protein. Length = 384 Score = 120 bits (290), Expect = 7e-28 Identities = 64/148 (43%), Positives = 82/148 (55%) Frame = +3 Query: 3 ENFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVAT 182 E FVTRKITR VAKI+LG +ELGNL + RDWGHA++YVEAMW +LQ D P DF +AT Sbjct: 229 ETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMWRILQHDSPDDFVIAT 288 Query: 183 GETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AI 362 G+ VR F +F G W + K + PT+ Sbjct: 289 GKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKD-GVIRVKVSPKYYRPTEVETLLGN 347 Query: 363 QAKAKQKLGWGPKVSFDQLVKDMVEADL 446 KAK+ LGW KV+ +LVK+MV +D+ Sbjct: 348 AEKAKKTLGWEAKVTVPELVKEMVASDI 375 >AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose 4,6-dehydratase protein. Length = 384 Score = 120 bits (290), Expect = 7e-28 Identities = 64/148 (43%), Positives = 82/148 (55%) Frame = +3 Query: 3 ENFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVAT 182 E FVTRKITR VAKI+LG +ELGNL + RDWGHA++YVEAMW +LQ D P DF +AT Sbjct: 229 ETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMWRILQHDSPDDFVIAT 288 Query: 183 GETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AI 362 G+ VR F +F G W + K + PT+ Sbjct: 289 GKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKD-GVIRVKVSPKYYRPTEVETLLGN 347 Query: 363 QAKAKQKLGWGPKVSFDQLVKDMVEADL 446 KAK+ LGW KV+ +LVK+MV +D+ Sbjct: 348 AEKAKKTLGWEAKVTVPELVKEMVASDI 375 >AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose 4,6-dehydratase protein. Length = 399 Score = 120 bits (290), Expect = 7e-28 Identities = 64/148 (43%), Positives = 82/148 (55%) Frame = +3 Query: 3 ENFVTRKITRGVAKITLGLMPYLELGNLDSKRDWGHAKDYVEAMWXMLQQDEPXDFXVAT 182 E FVTRKITR VAKI+LG +ELGNL + RDWGHA++YVEAMW +LQ D P DF +AT Sbjct: 244 ETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMWRILQHDSPDDFVIAT 303 Query: 183 GETHXVRXFXXKSFXCXGRXXAWRAPACTRPDTTRTRNNYSSKSTLSISAPTKWTYY*AI 362 G+ VR F +F G W + K + PT+ Sbjct: 304 GKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKD-GVIRVKVSPKYYRPTEVETLLGN 362 Query: 363 QAKAKQKLGWGPKVSFDQLVKDMVEADL 446 KAK+ LGW KV+ +LVK+MV +D+ Sbjct: 363 AEKAKKTLGWEAKVTVPELVKEMVASDI 390 >U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical protein C01F1.3a protein. Length = 631 Score = 27.5 bits (58), Expect = 8.6 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +3 Query: 369 KAKQKLGWGPKVSFDQLVKDMVEADLD**KRHQKRRIYL 485 KAK LGW P SFD ++ V + L K H+ ++++ Sbjct: 302 KAKNDLGWEPTTSFDDGMRHTVASAL---KEHKHVKMHV 337 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,484,173 Number of Sequences: 27780 Number of extensions: 225745 Number of successful extensions: 523 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 496 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 505 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1423653030 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -